RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 IGKV5-2P06315 115 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 PRR29P0C7W0 189 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 C8orf88P0DMB2 117 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 GJA1P17302 382 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 CA6P23280 308 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 CNTFRP26992 372 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 HOXA13P31271 388 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 TLX1P31314 330 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 HMGCLP35914 325 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 NBL1P41271 181 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 RGRP47804 291 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 GIPRP48546 466 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SERPINB8P50452 374 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF445P59923 1031 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 PLCB2Q00722 1185 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SLC6A3Q01959 620 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ROR2Q01974 943 aaKnown RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 KEAP1Q14145 624 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SNRNP35Q16560 246 aaKnown RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 FAM102BQ5T8I3 360 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 LIPNQ5VXI9 398 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 KIAA1211LQ6NV74 962 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 FAAP20Q6NZ36 180 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 DENND1BQ6P3S1 775 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 PSRC1Q6PGN9 363 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 C10orf99Q6UWK7 81 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 UNQ9370/PRO34162Q6UXP9 181 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 BRD3OSQ6XYD6 125 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 PRICKLE2Q7Z3G6 844 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 KRT28Q7Z3Y7 464 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 CYP2U1Q7Z449 544 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 MRGPREQ86SM8 312 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 AMIGO3Q86WK7 504 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 CARM1Q86X55 608 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF280BQ86YH2 543 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 WWC1Q8IX03 1113 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 LAS2Q8IYD9 372 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 FAM26EQ8N5C1 309 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SH2D3CQ8N5H7 860 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 C3orf56Q8N813 242 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF441Q8N8Z8 693 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF555Q8NEP9 628 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ST13P5Q8NFI4 369 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 OR4K1Q8NGD4 311 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 OR52K1Q8NGK4 314 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 DNAJB8Q8NHS0 232 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ANGPTL6Q8NI99 470 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 RBM46Q8TBY0 533 aaKnown RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 DDI1Q8WTU0 396 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 LARP4BQ92615 738 aaKnown RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 PRCCQ92733 491 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 RORBQ92753 470 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SLC41A3Q96GZ6 507 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 TIMD4Q96H15 378 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 GPATCH3Q96I76 525 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 NACC1Q96RE7 527 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ADPGKQ9BRR6 497 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF436Q9C0F3 470 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF334Q9HCZ1 680 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 IL17RBQ9NRM6 502 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 DEPPQ9NTK1 212 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 CCM2LQ9NUG4 571 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SPATA6Q9NWH7 488 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 AURKAIP1Q9NWT8 199 aaPredicted RBP-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 NYAP2Q9P242 653 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SPASTQ9UBP0 616 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 CLIP2Q9UDT6 1046 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 STRIP2Q9ULQ0 834 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 PCDHGC3Q9UN70 934 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SOX13Q9UN79 622 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 OSGIN2Q9Y236 505 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 KDM2AQ9Y2K7 1162 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 PCDHB13Q9Y5F0 798 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 ZHX2Q9Y6X8 837 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 INSRP06213 1382 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 RFX7Q2KHR2 1363 aa-1.74□□□□□ -2.69
SNORD54-201ENST00000459159 SIPA1L3O60292 1781 aaPredicted RBP-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 KIAA1671Q9BY89 1806 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 IGLV7-46A0A075B6I9 117 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 A0A0G2JMM0 328 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 A0A1W2PPB8 328 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 A0A1W2PR80 420 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 A0A1W2PRS3 328 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 C5orf60A6NFR6 353 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 KIR3DP1A8MWS1 328 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 UPK3BL1B0FP48 263 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 TMEM229AB2RXF0 380 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 UPK3BL2E5RIL1 263 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 GOLGA6L22H0YM25 854 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 K7EIL1 84 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 M0R2N6 131 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 FFAR3O14843 346 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 EDIL3O43854 480 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 PCDHGA12O60330 932 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 ZPR1O75312 459 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 DEAF1O75398 565 aaPredicted RBP-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 AP2A2O94973 939 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 VNN2O95498 520 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 LY86O95711 162 aa-1.75□□□□□ -2.69
SNORD54-201ENST00000459159 CLDN1O95832 211 aa-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms