RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 WTIPA6NIX2 430 aaPredicted RBP11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 HLA-DRAP01903 254 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 MAP4P27816 1152 aaKnown RBP11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 AVPR1AP37288 418 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 CASP2P42575 452 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 MFSD10Q14728 455 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 TBCCQ15814 346 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 ZNF410Q86VK4 478 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 THAP11Q96EK4 314 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 HACD3Q9P035 362 aa11.22□□□□□ -0.61
AMBRA1-202ENST00000458649 HIST1H2AGP0C0S8 130 aaPredicted RBP11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 HIST1H2ADP20671 130 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 PRMT2P55345 433 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 ACVR2BQ13705 512 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 IMPG1Q17R60 797 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 PID1Q7Z2X4 250 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 OOSP2Q86WS3 158 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 ZNF557Q8N988 423 aaPredicted RBP11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 HIST1H2AHQ96KK5 128 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 HIST1H2AJQ99878 128 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 H2AFJQ9BTM1 129 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 UNC45AQ9H3U1 944 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 ZNF229Q9UJW7 825 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 GLTPD2A6NH11 291 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 C2CD2LO14523 706 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 CA12O43570 354 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 DIAPH2O60879 1101 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 EFCAB14O75071 495 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 TOM1L1O75674 476 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 F9P00740 461 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 NSUN2Q08J23 767 aaKnown RBP eCLIP11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 SLC12A1Q13621 1099 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 DEFB128Q7Z7B8 93 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 C4orf19Q8IY42 314 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 TBX20Q9UMR3 447 aa11.21□□□□□ -0.61
AMBRA1-202ENST00000458649 DEAF1O75398 565 aaPredicted RBP11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 CKMP06732 381 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 OXCT1P55809 520 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 ADCY2Q08462 1091 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 TRIP13Q15645 432 aaPredicted RBP11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 RIN2Q8WYP3 895 aaPredicted RBP11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 AKT1S1Q96B36 256 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 APBA2Q99767 749 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 IRF1P10914 325 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 KRT4P19013 534 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 CHRNA3P32297 505 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 PSEN2P49810 448 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 HDAC4P56524 1084 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 CORO7P57737 925 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 PAN2Q504Q3 1202 aaKnown RBP11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 LMBRD2Q68DH5 695 aaPredicted RBP11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 C4orf22Q6V702 233 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 NLRP14Q86W24 1093 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 CASP10Q92851 521 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 SENP7Q9BQF6 1050 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.21□□□□□ -0.626e-7■■■■□ 23.6
AMBRA1-202ENST00000458649 SNX12Q9UMY4 172 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 TRPV2Q9Y5S1 764 aa11.21□□□□□ -0.62
AMBRA1-202ENST00000458649 EEF2KO00418 725 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 ZW10O43264 779 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 HMBSP08397 361 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 PAX3P23760 479 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SERPINB3P29508 390 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 VGLL4Q14135 290 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 POLD3Q15054 466 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 GRIK4Q16099 956 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 UGP2Q16851 508 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 Q4G0T1 1027 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 OLFML2BQ68BL8 750 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 WDR75Q8IWA0 830 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 RCOR2Q8IZ40 523 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SCFD1Q8WVM8 642 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SRPK1Q96SB4 655 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 NDE1Q9NXR1 346 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 RSPH10B2B2RC85 870 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 FBXO21O94952 628 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 MMEP08473 750 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 RSPH10BP0C881 870 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 GTF2H1P32780 548 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 ALDH5A1P51649 535 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 ZNF177Q13360 481 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 STARD3Q14849 445 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 EARS2Q5JPH6 523 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 KSR1Q8IVT5 923 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 UXTQ9UBK9 157 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SNX24Q9Y343 169 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 AK9Q5TCS8 1911 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 MRC1P22897 1456 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 KRT14P02533 472 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SLC9A1P19634 815 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 AKT1P31749 480 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms