RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 ANKRD49Q8WVL7 239 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 THAP11Q96EK4 314 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 CCDC114Q96M63 670 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 YIPF4Q9BSR8 244 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 KATNAL1Q9BW62 490 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 VCPKMTQ9H867 229 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 ZFATQ9P243 1243 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 HERC5Q9UII4 1024 aaKnown RBP12.47□□□□□ -0.41
SYNE2-207ENST00000458046 ZNF180Q9UJW8 692 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 NRXN2Q9P2S2 1712 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 RPTORQ8N122 1335 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 SYNGAP1Q96PV0 1343 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 YDJCA8MPS7 323 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 MIF4GDA9UHW6 222 aaKnown RBP12.47□□□□□ -0.41
SYNE2-207ENST00000458046 ANKRD63C9JTQ0 380 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 SPOPO43791 374 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 CALCAP01258 141 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 CHN1P15882 459 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 MUTP22033 750 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 CHRNA3P32297 505 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 MXI1P50539 228 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
SYNE2-207ENST00000458046 GFOD2Q3B7J2 385 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 C11orf63Q6NUN7 778 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 HOOK3Q86VS8 718 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 CCDC25Q86WR0 208 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 CACNA2D3Q8IZS8 1091 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 SAAL1Q96ER3 474 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 KREMEN1Q96MU8 473 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 RIT2Q99578 217 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 VEZTQ9HBM0 779 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 ZFYVE28Q9HCC9 887 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
SYNE2-207ENST00000458046 NFIBO00712 420 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 B3GALNT1O75752 331 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 PMLP29590 882 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 CD86P42081 329 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 MAPK9P45984 424 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 RARRES1P49788 294 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 SEL1L2Q5TEA6 688 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 CBWD2Q8IUF1 395 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 TAB3Q8N5C8 712 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 SEMA4DQ92854 862 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 TATDN2Q93075 761 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 XPO6Q96QU8 1125 aaKnown RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 BARD1Q99728 777 aaKnown RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 SLC39A3Q9BRY0 314 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 TRIM8Q9BZR9 551 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 CCDC113Q9H0I3 377 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 AASDHPPTQ9NRN7 309 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 GGA2Q9UJY4 613 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 C2CD2Q9Y426 696 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 SERTM1A2A2V5 107 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 RGS16O15492 202 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 DHX15O43143 795 aaKnown RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 ADRB2P07550 413 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 PAEPP09466 180 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 PLS3P13797 630 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 DRD4P21917 467 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 CTNNA2P26232 953 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 PREPLQ4J6C6 727 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 ERMARDQ5T6L9 678 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 GKAP1Q5VSY0 366 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 PHLDB2Q86SQ0 1253 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 EPS8L3Q8TE67 593 aaKnown RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 POF1BQ8WVV4 589 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 NACC2Q96BF6 587 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 KIFC3Q9BVG8 833 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 NUP85Q9BW27 656 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 SLC13A1Q9BZW2 595 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 DONSONQ9NYP3 566 aa12.46□□□□□ -0.41
SYNE2-207ENST00000458046 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 DBR1Q9UK59 544 aaKnown RBP12.46□□□□□ -0.41
SYNE2-207ENST00000458046 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 NUDT17P0C025 328 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 RARAP10276 462 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 DGKGP49619 791 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 DRG2P55039 364 aaKnown RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 HADHBP55084 474 aaKnown RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 SPP2Q13103 211 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CCDC38Q502W7 563 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CEP68Q76N32 757 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 BTN2A1Q7KYR7 527 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 SIX5Q8N196 739 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF564Q8TBZ8 553 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CHMP6Q96FZ7 201 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 FAM84AQ96KN4 292 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 TMEM39BQ9GZU3 492 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 PCYOX1Q9UHG3 505 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 DMTF1Q9Y222 760 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 MSRB2Q9Y3D2 182 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 PFASO15067 1338 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CCDC169A6NNP5 214 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 PODXLO00592 558 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 MUSKO15146 869 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms