RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SAMD9LQ8IVG5 1584 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 ASB14A6NK59 587 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 PGK2P07205 417 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 CDC16Q13042 620 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 NOA1Q8NC60 698 aaKnown RBP20.49■□□□□ 0.87
SNX27-204ENST00000458013 POLR1AO95602 1720 aaPredicted RBP20.49■□□□□ 0.87
SNX27-204ENST00000458013 LZTS3O60299 673 aaPredicted RBP20.49■□□□□ 0.87
SNX27-204ENST00000458013 NDUFB10O96000 172 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 ITIH2P19823 946 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 SLC29A2Q14542 456 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 ZNF669Q96BR6 464 aaPredicted RBP20.49■□□□□ 0.87
SNX27-204ENST00000458013 MED15Q96RN5 788 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 DNAJC7Q99615 494 aa20.49■□□□□ 0.87
SNX27-204ENST00000458013 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 OSBPL10Q9BXB5 764 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 ADGRL3Q9HAR2 1447 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 LSP1P33241 339 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 PIGHQ14442 188 aaPredicted RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 SGSM1Q2NKQ1 1148 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 CHMP1BQ7LBR1 199 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 CASKIN2Q8WXE0 1202 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 DDX50Q9BQ39 737 aaKnown RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 RNF103O00237 685 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 NFIBO00712 420 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 SERPINB3P29508 390 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 EFNA5P52803 228 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 SHROOM2Q13796 1616 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 MAP3K10Q02779 954 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 HEATR4Q86WZ0 1026 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 TBC1D16Q8TBP0 767 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 IGDCC4Q8TDY8 1250 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 POP1Q99575 1024 aaKnown RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 H0YC42 278 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 NCALDP61601 193 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 EXOSC10Q01780 885 aaKnown RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 WASHC5Q12768 1159 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 KCNB1Q14721 858 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 GJC2Q5T442 439 aaPredicted RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 RASGRP2Q7LDG7 609 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 TSPAN17Q96FV3 270 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 OSBPL8Q9BZF1 889 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 SLC40A1Q9NP59 571 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 HAO1Q9UJM8 370 aa20.48■□□□□ 0.87
SNX27-204ENST00000458013 LSM7Q9UK45 103 aaKnown RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 SMG5Q9UPR3 1016 aaKnown RBP20.48■□□□□ 0.87
SNX27-204ENST00000458013 WDR19Q8NEZ3 1342 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 DLGAP3O95886 979 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 GYPCP04921 128 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 NPEPPSP55786 919 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 ZNF786Q8N393 782 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 ASZ1Q8WWH4 475 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 C7orf25Q9BPX7 421 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 YY1P25490 414 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 AP3M2P53677 418 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 ZNF543Q08ER8 600 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 CATSPER1Q8NEC5 780 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.47■□□□□ 0.87
SNX27-204ENST00000458013 NFKBIL1Q9UBC1 381 aaPredicted RBP20.47■□□□□ 0.87
SNX27-204ENST00000458013 CNOT7Q9UIV1 285 aaKnown RBP20.47■□□□□ 0.87
SNX27-204ENST00000458013 NAB2Q15742 525 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 ZSWIM2Q8NEG5 633 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 DLGAP2Q9P1A6 1054 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 POLBP06746 335 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 ANGEL2Q5VTE6 544 aaKnown RBP20.47■□□□□ 0.87
SNX27-204ENST00000458013 TC2NQ8N9U0 490 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 KRT87PA6NCN2 255 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 DEAF1O75398 565 aaPredicted RBP20.47■□□□□ 0.87
SNX27-204ENST00000458013 ARHGAP17Q68EM7 881 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 DNAJC9Q8WXX5 260 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 E2F7Q96AV8 911 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 OLFML3Q9NRN5 406 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 PRR12Q9ULL5 1215 aa20.47■□□□□ 0.87
SNX27-204ENST00000458013 NPM3O75607 178 aaKnown RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 ZNF157P51786 506 aaPredicted RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 NEDD1Q8NHV4 660 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 GPRC5CQ9NQ84 441 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 POU4F1Q01851 419 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 NMRK2Q9NPI5 230 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 KCNJ6P48051 423 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 LRIG3Q6UXM1 1119 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 SYDE1Q6ZW31 735 aaPredicted RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 CINPQ9BW66 212 aaPredicted RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 PCDHB7Q9Y5E2 793 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 NEO1Q92859 1461 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 CHI3L1P36222 383 aaPredicted RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 COILP38432 576 aaPredicted RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 CCDC15Q0P6D6 951 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 TRIM25Q14258 630 aaKnown RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 TAAR1Q96RJ0 339 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.46■□□□□ 0.87
SNX27-204ENST00000458013 DUSP10Q9Y6W6 482 aa20.46■□□□□ 0.87
SNX27-204ENST00000458013 MLNP12872 115 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 HOXD10P28358 340 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 CLK1P49759 484 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 EML3Q32P44 896 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 DNAL1Q4LDG9 190 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 KIRREL3Q8IZU9 778 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms