RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 MYBPC3Q14896 1274 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 KHDC1Q4VXA5 237 aaKnown RBP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 SLC39A4Q6P5W5 647 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 APLFQ8IW19 511 aaPredicted RBP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 SRRM1Q8IYB3 904 aaKnown RBP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 LMO3Q8TAP4 145 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 CKAP2Q8WWK9 683 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 SPOCK2Q92563 424 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 FAM136AQ96C01 138 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 PLEKHG4BQ96PX9 1271 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 NENFQ9UMX5 172 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 ZNF646O15015 1829 aaPredicted RBP14.32□□□□□ -0.12
TOP3B-213ENST00000457179 DDX3YO15523 660 aaKnown RBP14.32□□□□□ -0.12
TOP3B-213ENST00000457179 FAM163BP0C2L3 166 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 IMPDH2P12268 514 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 WNT7BP56706 349 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 LLGL2Q6P1M3 1020 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 SV2AQ7L0J3 742 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 DPH6Q7L8W6 267 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 SLFN11Q7Z7L1 901 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 PRPF31Q8WWY3 499 aaKnown RBP14.32□□□□□ -0.12
TOP3B-213ENST00000457179 TRAPPC9Q96Q05 1148 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 MMP19Q99542 508 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 ANKEF1Q9NU02 776 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 GINM1Q9NU53 330 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 GRHL1Q9NZI5 618 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 STOML1Q9UBI4 398 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 EXOC7Q9UPT5 735 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 FER1L6Q2WGJ9 1857 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 TCRBV7S2A1N4TA0A589 114 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 ATP6V1G1O75348 118 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 OATP04181 439 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 VHLP40337 213 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 CLCN3P51790 818 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 NOP9Q86U38 636 aaKnown RBP14.32□□□□□ -0.12
TOP3B-213ENST00000457179 MAP3K20Q9NYL2 800 aaKnown RBP14.32□□□□□ -0.12
TOP3B-213ENST00000457179 ADAMTS5Q9UNA0 930 aa14.32□□□□□ -0.12
TOP3B-213ENST00000457179 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.32□□□□□ -0.12
TOP3B-213ENST00000457179 ANKRD62A6NC57 917 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 SPOPO43791 374 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 COMTP21964 271 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 OAZ1P54368 228 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 DNAJC3Q13217 504 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 PARP6Q2NL67 630 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 SPDYCQ5MJ68 293 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 C1orf220Q5T0J3 134 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 DAB2IPQ5VWQ8 1189 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 RFX8Q6ZV50 586 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 MCPH1Q8NEM0 835 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 CHST13Q8NET6 341 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 IFT43Q96FT9 208 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 NKIRAS1Q9NYS0 192 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 CHKBQ9Y259 395 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 HTTP42858 3142 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 MAFGO15525 162 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 KRT36O76013 467 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 FARP2O94887 1054 aaPredicted RBP14.31□□□□□ -0.12
TOP3B-213ENST00000457179 CD58P19256 250 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 GJC1P36383 396 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 SKIV2L2P42285 1042 aaKnown RBP14.31□□□□□ -0.12
TOP3B-213ENST00000457179 DEUP1Q05D60 604 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 PPATQ06203 517 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 TMEM62Q0P6H9 643 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 ACBD5Q5T8D3 534 aaPredicted RBP14.31□□□□□ -0.12
TOP3B-213ENST00000457179 RNF43Q68DV7 783 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 KREMEN1Q96MU8 473 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 MSTO1Q9BUK6 570 aa14.31□□□□□ -0.12
TOP3B-213ENST00000457179 GSTTP1A0A1W2PQM5 241 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 GLRA2P23416 452 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 ZNF653Q96CK0 615 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 DTNBP1Q96EV8 351 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 ZWILCHQ9H900 591 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 DMAP1Q9NPF5 467 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-213ENST00000457179 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 CAPN9O14815 690 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 PFDN1O60925 122 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 TJP3O95049 919 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 SPATA31D3P0C874 917 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 MTFR1Q15390 333 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 DBN1Q16643 649 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 C1QTNF12Q5T7M4 302 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 SCARA5Q6ZMJ2 495 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 SPATA31D4Q6ZUB0 917 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 NRG4Q8WWG1 115 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 CARD9Q9H257 536 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 DCLRE1BQ9H816 532 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 SLCO1B3Q9NPD5 702 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 AGO2Q9UKV8 859 aaKnown RBP14.3□□□□□ -0.12
TOP3B-213ENST00000457179 A0A0A6YYK5 440 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-213ENST00000457179 GSTA2P09210 222 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 MUTP22033 750 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 FOXN2P32314 431 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 GJA5P36382 358 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 CCNFP41002 786 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 TNFSF9P41273 254 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 CNPY1Q3B7I2 92 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 KRT39Q6A163 491 aa14.3□□□□□ -0.12
TOP3B-213ENST00000457179 CCDC105Q8IYK2 499 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms