RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 SNW1Q13573 536 aaKnown RBP19.04■□□□□ 0.64
COL13A1-206ENST00000456019 VEPH1Q14D04 833 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 TEAD2Q15562 447 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 MLF2Q15773 248 aaPredicted RBP19.04■□□□□ 0.64
COL13A1-206ENST00000456019 KNOP1Q1ED39 458 aaKnown RBP19.04■□□□□ 0.64
COL13A1-206ENST00000456019 SLC44A4Q53GD3 710 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 TOP6BLQ8N6T0 577 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 RDH13Q8NBN7 331 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 OR5B17Q8NGF7 314 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 SPATA18Q8TC71 538 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 FAM200AQ8TCP9 573 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 ZSWIM3Q96MP5 696 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 ACBD6Q9BR61 282 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 SCAND2PQ9GZW5 306 aaPredicted RBP19.04■□□□□ 0.64
COL13A1-206ENST00000456019 SLITRK6Q9H5Y7 841 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 EXOC1Q9NV70 894 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 DDX43Q9NXZ2 648 aaKnown RBP19.04■□□□□ 0.64
COL13A1-206ENST00000456019 HPSEQ9Y251 543 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 SIT1Q9Y3P8 196 aa19.04■□□□□ 0.64
COL13A1-206ENST00000456019 A0A1W2PRU2 124 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 KLRC4O43908 158 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 PRPF40AO75400 957 aaKnown RBP19.03■□□□□ 0.64
COL13A1-206ENST00000456019 MYL1P05976 194 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 PSMD2Q13200 908 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 PSMD6Q15008 389 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 NFE2Q16621 373 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-206ENST00000456019 SCARA3Q6AZY7 606 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 C12orf56Q8IXR9 622 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 DTWD2Q8NBA8 298 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 GOLGA5Q8TBA6 731 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 ZSCAN18Q8TBC5 510 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-206ENST00000456019 HPDLQ96IR7 371 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 CHAMP1Q96JM3 812 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 FNBP1Q96RU3 617 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 PHOX2BQ99453 314 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 TRPV4Q9HBA0 871 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 ABI2Q9NYB9 513 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-206ENST00000456019 PCDHB5Q9Y5E4 795 aa19.03■□□□□ 0.64
COL13A1-206ENST00000456019 DLATP10515 647 aaKnown RBP19.02■□□□□ 0.64
COL13A1-206ENST00000456019 HAPLN1P10915 354 aaPredicted RBP19.02■□□□□ 0.64
COL13A1-206ENST00000456019 TNNI1P19237 187 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 SYKP43405 635 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 LHX1P48742 406 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 CYP24A1Q07973 514 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 BECN1Q14457 450 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 KMT5BQ4FZB7 885 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 DPH6Q7L8W6 267 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 ADGRF2Q8IZF7 708 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 E2F7Q96AV8 911 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 CGRRF1Q99675 332 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 LPIN3Q9BQK8 851 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 TRMT61BQ9BVS5 477 aaKnown RBP19.02■□□□□ 0.64
COL13A1-206ENST00000456019 ZNF334Q9HCZ1 680 aaPredicted RBP19.02■□□□□ 0.64
COL13A1-206ENST00000456019 FAM86C1Q9NVL1 165 aa19.02■□□□□ 0.64
COL13A1-206ENST00000456019 FAM237AA0A1B0GTK4 181 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 KANSL1LA0AUZ9 987 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 PSMC3P17980 439 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 ATF6P18850 670 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 PCSK1P29120 753 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 CDR1P51861 262 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 STK4Q13043 487 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 TAF12Q16514 161 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 INTS6LQ5JSJ4 861 aaKnown RBP19.01■□□□□ 0.63
COL13A1-206ENST00000456019 GAREM2Q75VX8 874 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 TRAPPC11Q7Z392 1133 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 PJA1Q8NG27 643 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 DEPDC1BQ8WUY9 529 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 DNASE1L2Q92874 299 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 CCDC127Q96BQ5 260 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 DDX23Q9BUQ8 820 aaKnown RBP19.01■□□□□ 0.63
COL13A1-206ENST00000456019 FOXQ1Q9C009 403 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 ATXN3LQ9H3M9 355 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 BRD9Q9H8M2 597 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 TMLHEQ9NVH6 421 aa19.01■□□□□ 0.63
COL13A1-206ENST00000456019 A0A1W2PQ27 194 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 A0A1W2PQ64 194 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 A0A1W2PQD8 194 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 GABRDO14764 452 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 EXOC3O60645 756 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 DCNP07585 359 aaKnown RBP19■□□□□ 0.63
COL13A1-206ENST00000456019 ACAT1P24752 427 aaKnown RBP19■□□□□ 0.63
COL13A1-206ENST00000456019 GABRR2P28476 465 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 VIPR2P41587 438 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 NDUFA8P51970 172 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 GRM2Q14416 872 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 SOWAHAQ2M3V2 549 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 ARHGAP15Q53QZ3 475 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 VITQ6UXI7 678 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 OSTM1Q86WC4 334 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 KIAA0895Q8NCT3 520 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 GIPC2Q8TF65 315 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 IRF7Q92985 503 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 GCNAQ96QF7 691 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 ABCB6Q9NP58 842 aa19■□□□□ 0.63
COL13A1-206ENST00000456019 CDC25CP30307 473 aa18.99■□□□□ 0.63
COL13A1-206ENST00000456019 ANGPT1Q15389 498 aa18.99■□□□□ 0.63
COL13A1-206ENST00000456019 LIMS2Q7Z4I7 341 aa18.99■□□□□ 0.63
COL13A1-206ENST00000456019 MFSD6LQ8IWD5 586 aa18.99■□□□□ 0.63
COL13A1-206ENST00000456019 FSIP1Q8NA03 581 aa18.99■□□□□ 0.63
COL13A1-206ENST00000456019 CCDC47Q96A33 483 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms