RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 VRTNQ9H8Y1 702 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 MAN1B1Q9UKM7 699 aa18.61■□□□□ 0.57
USP39-208ENST00000455732 NARSO43776 548 aaKnown RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 CST3P01034 146 aaPredicted RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 C4BPAP04003 597 aaKnown RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 PTPN2P17706 415 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 PSMC2P35998 433 aaKnown RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 PPP1R2P41236 205 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 LHX1P48742 406 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 MYL7Q01449 175 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 TWF1Q12792 350 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 ADAM9Q13443 819 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 SLC5A9Q2M3M2 681 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 TDRD10Q5VZ19 366 aaKnown RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 NPAS3Q8IXF0 933 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 ZC3H3Q8IXZ2 948 aaKnown RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 DCP1BQ8IZD4 617 aaKnown RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 ADGRF2Q8IZF7 708 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 SYAP1Q96A49 352 aaPredicted RBP18.6■□□□□ 0.57
USP39-208ENST00000455732 ACBD6Q9BR61 282 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 XYLT2Q9H1B5 865 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 CRISPLD1Q9H336 500 aa18.6■□□□□ 0.57
USP39-208ENST00000455732 DENND4CQ5VZ89 1909 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 FAM163BP0C2L3 166 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 MRE11P49959 708 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 VAMP7P51809 220 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 DLG4P78352 724 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 TSPY1Q01534 308 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 DUSP4Q13115 394 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 TRPC3Q13507 836 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 ZACNQ401N2 412 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 SLC39A12Q504Y0 691 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 PRSS36Q5K4E3 855 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 C1orf220Q5T0J3 134 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 POTEHQ6S545 545 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 LRRTM3Q86VH5 581 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 OSTM1Q86WC4 334 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 ELMOD1Q8N336 334 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 ATAD1Q8NBU5 361 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 SPPL2BQ8TCT7 592 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 KBTBD7Q8WVZ9 684 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 FGF14Q92915 247 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 TSG101Q99816 390 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 DDX43Q9NXZ2 648 aaKnown RBP18.59■□□□□ 0.57
USP39-208ENST00000455732 CEP72Q9P209 647 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 MRPS23Q9Y3D9 190 aaKnown RBP18.59■□□□□ 0.57
USP39-208ENST00000455732 NUMBLQ9Y6R0 609 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 CACNA1HO95180 2353 aa18.59■□□□□ 0.57
USP39-208ENST00000455732 CETN3O15182 167 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 TACC1O75410 805 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 KRT13P13646 458 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 WARSP23381 471 aaKnown RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 PCSK1P29120 753 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 EPHA5P54756 1037 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 VCPP55072 806 aaKnown RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 MYL6P60660 151 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 BIRC3Q13489 604 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 STIM1Q13586 685 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 NCOA4Q13772 614 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 MORC3Q14149 939 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 NFE2Q16621 373 aaPredicted RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 INTS6LQ5JSJ4 861 aaKnown RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 FOXR2Q6PJQ5 311 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 PARM1Q6UWI2 310 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 LEMD2Q8NC56 503 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 ST13P5Q8NFI4 369 aaPredicted RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 DHTKD1Q96HY7 919 aaPredicted RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 IPO9Q96P70 1041 aaKnown RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 PKMYT1Q99640 499 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 CORO1BQ9BR76 489 aa18.58■□□□□ 0.56
USP39-208ENST00000455732 RPP25Q9BUL9 199 aaKnown RBP18.58■□□□□ 0.56
USP39-208ENST00000455732 PSMA7O14818 248 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 SLC16A3O15427 465 aaKnown RBP18.57■□□□□ 0.56
USP39-208ENST00000455732 PHACTR2O75167 634 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 MICAL2O94851 1124 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 VNN1O95497 513 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 SRFP11831 508 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 BMP6P22004 513 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 AVPR2P30518 371 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 CCR2P41597 374 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 TUFMP49411 452 aaKnown RBP18.57■□□□□ 0.56
USP39-208ENST00000455732 PMS1P54277 932 aaKnown RBP18.57■□□□□ 0.56
USP39-208ENST00000455732 FKBP3Q00688 224 aaKnown RBP18.57■□□□□ 0.56
USP39-208ENST00000455732 IER5LQ5T953 404 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 IQCEQ6IPM2 695 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 MTSS1LQ765P7 747 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 SV2AQ7L0J3 742 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 ING5Q8WYH8 240 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 TCEAL4Q96EI5 215 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 DNAJC25Q9H1X3 360 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 ABCB6Q9NP58 842 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 GDE1Q9NZC3 331 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 WNT16Q9UBV4 365 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 ASB3Q9Y575 518 aa18.57■□□□□ 0.56
USP39-208ENST00000455732 NRG2O14511 850 aaPredicted RBP18.56■□□□□ 0.56
USP39-208ENST00000455732 EPB41P11171 864 aaKnown RBP18.56■□□□□ 0.56
USP39-208ENST00000455732 CEBPBP17676 345 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 CCNE1P24864 410 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms