RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 CBWD6Q4V339 395 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 CBWD3Q5JTY5 395 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 RTP2Q5QGT7 225 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 CBWD5Q5RIA9 395 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 WSCD1Q658N2 575 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 TRIM65Q6PJ69 517 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 VSTM1Q6UX27 236 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 ITIH5Q86UX2 942 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 TMEM173Q86WV6 379 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-205ENST00000454964 DHX40Q8IX18 779 aaKnown RBP10.13□□□□□ -0.79
ATXN3-205ENST00000454964 TCEAL8Q8IYN2 117 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 PPM1KQ8N3J5 372 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 ZNF397Q8NF99 534 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-205ENST00000454964 CMASQ8NFW8 434 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-205ENST00000454964 NECTIN4Q96NY8 510 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 MED15Q96RN5 788 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 ERGIC2Q96RQ1 377 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 CLSTN3Q9BQT9 956 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 VPS16Q9H269 839 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 GCNT4Q9P109 453 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 MYO6Q9UM54 1294 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 CDY1Q9Y6F8 540 aa10.13□□□□□ -0.79
ATXN3-205ENST00000454964 LGALS16A8MUM7 142 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 PRRG1O14668 218 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 SPTLC1O15269 473 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 CLASP2O75122 1294 aaKnown RBP10.12□□□□□ -0.79
ATXN3-205ENST00000454964 PAEPP09466 180 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 TPM1P09493 284 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 DNAJB1P25685 340 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 PON1P27169 355 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 MAGEA11P43364 429 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 NRIP1P48552 1158 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 CLCN4P51793 760 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 GUCY2FP51841 1108 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 CUL2Q13617 745 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 COL19A1Q14993 1142 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 VEPH1Q14D04 833 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 CFAP221Q4G0U5 840 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 TCEAL5Q5H9L2 206 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 INTS6LQ5JSJ4 861 aaKnown RBP10.12□□□□□ -0.79
ATXN3-205ENST00000454964 FAM171BQ6P995 826 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 LILRA6Q6PI73 481 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 TAS1R1Q7RTX1 841 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 SPATA2LQ8IUW3 424 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-205ENST00000454964 NEK11Q8NG66 645 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 MYCBPAPQ8TBZ2 947 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 BCL7CQ8WUZ0 217 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-205ENST00000454964 MYLIPQ8WY64 445 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 RABGGTAQ92696 567 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 HLA-CQ95604 372 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 PCMTD1Q96MG8 357 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-205ENST00000454964 FAM161BQ96MY7 647 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 PHF12Q96QT6 1004 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 VN1R3Q9BXE9 311 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 INTS2Q9H0H0 1204 aaKnown RBP10.12□□□□□ -0.79
ATXN3-205ENST00000454964 ZCWPW1Q9H0M4 648 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 SFXN1Q9H9B4 322 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 COMMD8Q9NX08 183 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 L1RE1Q9UN81 338 aa10.12□□□□□ -0.79
ATXN3-205ENST00000454964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.12□□□□□ -0.79
ATXN3-205ENST00000454964 A0A1B0GTH6 734 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 EPOPA6NHQ4 379 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 SOBPA7XYQ1 873 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 HIDE1A8MVS5 230 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 RFXAPO00287 272 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 TRIM66O15016 1216 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 TGM5O43548 720 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 PAPLNO95428 1278 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 LRG1P02750 347 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 PTPN1P18031 435 aaKnown RBP10.11□□□□□ -0.79
ATXN3-205ENST00000454964 ANXA13P27216 316 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 MTHFRP42898 656 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 ASPAP45381 313 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 PPP3CCP48454 512 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 EPHB3P54753 998 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 ROR1Q01973 937 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 PTK2Q05397 1052 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 TRIM14Q14142 442 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 SKIV2LQ15477 1246 aaKnown RBP10.11□□□□□ -0.79
ATXN3-205ENST00000454964 TAF12Q16514 161 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 MEA1Q16626 185 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 CTC1Q2NKJ3 1217 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 PABPC1LQ4VXU2 614 aaKnown RBP10.11□□□□□ -0.79
ATXN3-205ENST00000454964 MIIPQ5JXC2 388 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 PPM1LQ5SGD2 360 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 ATAT1Q5SQI0 421 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 IQCEQ6IPM2 695 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 PPP1R2P3Q6NXS1 205 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 B3GALNT2Q8NCR0 500 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 KREMEN2Q8NCW0 462 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 LMO3Q8TAP4 145 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 SLC22A17Q8WUG5 538 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 TMEM176AQ96HP8 235 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 ZNF512Q96ME7 567 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-205ENST00000454964 RIPOR3Q96MK2 946 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 GUCD1Q96NT3 240 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 SYT15Q9BQS2 421 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 UBXN6Q9BZV1 441 aa10.11□□□□□ -0.79
ATXN3-205ENST00000454964 GPR88Q9GZN0 384 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms