RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF397Q8NF99 534 aaPredicted RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 ABHD8Q96I13 439 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 UROC1Q96N76 676 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 MSTO1Q9BUK6 570 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 KLC2Q9H0B6 622 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 DPEP3Q9H4B8 488 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 GOLGA2P5Q9HBQ8 144 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 ANLNQ9NQW6 1124 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 INTUQ9ULD6 942 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 TTC7AQ9ULT0 858 aaPredicted RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 SAMM50Q9Y512 469 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 LCHNA4D1U4 455 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 ZNF233A6NK53 670 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 O00370 1275 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 DDX3YO15523 660 aaKnown RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 TYMPP19971 482 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 SMTNP53814 917 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 SP4Q02446 784 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 TNK2Q07912 1038 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 TIGD5Q53EQ6 642 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 LCLAT1Q6UWP7 414 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 OLFML1Q6UWY5 402 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 TMC8Q8IU68 726 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 DBF4BQ8NFT6 615 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 RUBCNQ92622 972 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 LPPQ93052 612 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 SCLYQ96I15 445 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 DCBLD2Q96PD2 775 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 SLC2A13Q96QE2 648 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 PNKPQ96T60 521 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 TTLL2Q9BWV7 592 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 FUT8Q9BYC5 575 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 RNF208Q9H0X6 261 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 NHEJ1Q9H9Q4 299 aaPredicted RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 CYLDQ9NQC7 956 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 ARMCX3Q9UH62 379 aaPredicted RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 STOML2Q9UJZ1 356 aa5.32□□□□□ -1.56
RIF1-207ENST00000454583 COLQQ9Y215 455 aaPredicted RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 YBX2Q9Y2T7 364 aaKnown RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 CTDP1Q9Y5B0 961 aaPredicted RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
RIF1-207ENST00000454583 A0A087X0T9 212 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ABHD14A-ACY1A0A1B0GW23 586 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 DPYSL4O14531 572 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CLDN3O15551 220 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ZMYND10O75800 440 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CALCAP01258 141 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 FAM228BP0C875 321 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CYP11B1P15538 503 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 AKAP5P24588 427 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 LMO2P25791 158 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CYP2C18P33260 490 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 DSG2Q14126 1118 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CLEC16AQ2KHT3 1053 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 BEND6Q5SZJ8 279 aaPredicted RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 FAM109BQ6ICB4 259 aaPredicted RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 PGAP3Q96FM1 320 aaPredicted RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 PIWIL1Q96J94 861 aaKnown RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 CDK5RAP3Q96JB5 506 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 NLRP4Q96MN2 994 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.31□□□□□ -1.562e-9■■■■□ 20.1
RIF1-207ENST00000454583 DESI2Q9BSY9 194 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TLR10Q9BXR5 811 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 UBN1Q9NPG3 1134 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TJP2Q9UDY2 1190 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TFR2Q9UP52 801 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 LZTS1Q9Y250 596 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CAPN6Q9Y6Q1 641 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 DUSP10Q9Y6W6 482 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CETN3O15182 167 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 GALTP07902 379 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 MMP8P22894 467 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 PTPN7P35236 360 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 THPOP40225 353 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 GCLMP48507 274 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ZXDBP98169 803 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 DSG1Q02413 1049 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TUBB2AQ13885 445 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 MANEALQ5VSG8 457 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 SYT10Q6XYQ8 523 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 FUKQ8N0W3 1084 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 ZNF687Q8N1G0 1237 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 OR8K1Q8NGG5 319 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 DEPTORQ8TB45 409 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 STK32AQ8WU08 396 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 FAF2Q96CS3 445 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 IFT74Q96LB3 600 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CEP295NLQ96MC4 621 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 GLT1D1Q96MS3 346 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TMEM209Q96SK2 561 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 LPIN3Q9BQK8 851 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 HERPUD2Q9BSE4 406 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 PI4K2AQ9BTU6 479 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 TUBB2BQ9BVA1 445 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CCDC94Q9BW85 323 aaPredicted RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 IFIH1Q9BYX4 1025 aaKnown RBP5.31□□□□□ -1.56
RIF1-207ENST00000454583 VPS16Q9H269 839 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 CYP3A43Q9HB55 503 aa5.31□□□□□ -1.56
RIF1-207ENST00000454583 AVENQ9NQS1 362 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms