RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MAFBQ9Y5Q3 323 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-213ENST00000454468 MAD1L1Q9Y6D9 718 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 LACTBL1A8MY62 500 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 MYBL1P10243 752 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 CA4P22748 312 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 SLC1A1P43005 524 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 FAM47CQ5HY64 1035 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 TBC1D1Q86TI0 1168 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-213ENST00000454468 BRSK2Q8IWQ3 736 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 FAM71DQ8N9W8 422 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 TBC1D31Q96DN5 1066 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 DDX20Q9UHI6 824 aaKnown RBP12.63□□□□□ -0.39
SMPD4-213ENST00000454468 COQ4Q9Y3A0 265 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 RARGP13631 454 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 MAP3K10Q02779 954 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 E2F5Q15329 346 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 HHATQ5VTY9 493 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 JADE1Q6IE81 842 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 MPZL3Q6UWV2 235 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 JOSD2Q8TAC2 188 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 HPDLQ96IR7 371 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 RBM41Q96IZ5 413 aaKnown RBP12.63□□□□□ -0.39
SMPD4-213ENST00000454468 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-213ENST00000454468 TRAIPQ9BWF2 469 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 ADARB2Q9NS39 739 aaKnown RBP12.63□□□□□ -0.39
SMPD4-213ENST00000454468 SETD4Q9NVD3 440 aa12.63□□□□□ -0.39
SMPD4-213ENST00000454468 PPFIA2O75334 1257 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 UNGP13051 313 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-213ENST00000454468 PDGFRAP16234 1089 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ARL2P36404 184 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 FNTAP49354 379 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 SKOR1P84550 965 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ACOT1Q86TX2 421 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 RIOX2Q8IUF8 465 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 PYROXD1Q8WU10 500 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ACO2Q99798 780 aaKnown RBP12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ERAP1Q9NZ08 941 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 SEPT10Q9P0V9 454 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 KAT6AQ92794 2004 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 NFASCO94856 1347 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ITIH2P19823 946 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 MAGEA4P43358 317 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 PSEN1P49768 467 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 IRX4P78413 519 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ACTN3Q08043 901 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-213ENST00000454468 HIBCHQ6NVY1 386 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-213ENST00000454468 TRIM72Q6ZMU5 477 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 PACS2Q86VP3 889 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 KIAA0319LQ8IZA0 1049 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ACTL9Q8TC94 416 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMPD4-213ENST00000454468 ZDHHC18Q9NUE0 388 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 HESX1Q9UBX0 185 aa12.62□□□□□ -0.39
SMPD4-213ENST00000454468 MAFO75444 373 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 NPTXRO95502 500 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 TAF5Q15542 800 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 AGBL2Q5U5Z8 902 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 ARMCX2Q7L311 632 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 CFAP36Q96G28 342 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 FBXL18Q96ME1 805 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 GPR20Q99678 358 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 HMGXB4Q9UGU5 601 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 TTLL3Q9Y4R7 772 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 PRPSAP2O60256 369 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 ZC3H11AO75152 810 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 STBD1O95210 358 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 P4HA1P13674 534 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 LCP1P13796 627 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 DESP17661 470 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 AKAP5P24588 427 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 YWHAEP62258 255 aaKnown RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 C15orf59Q2T9L4 293 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 C2orf40Q9H1Z8 148 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 CDT1Q9H211 546 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 CNOT10Q9H9A5 744 aaKnown RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 PCYOX1Q9UHG3 505 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 GPR25O00155 361 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 MAPK13O15264 365 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 GH1P01241 217 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 GBP1P32455 592 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 TMEM132DQ14C87 1099 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 FASTKD3Q14CZ7 662 aaKnown RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 CELF3Q5SZQ8 465 aaKnown RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 ZNF677Q86XU0 584 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 WDR49Q8IV35 697 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 CCDC63Q8NA47 563 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 LPIN3Q9BQK8 851 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 JPH2Q9BR39 696 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-213ENST00000454468 KIF9Q9HAQ2 790 aa12.61□□□□□ -0.39
SMPD4-213ENST00000454468 H0YGN5 161 aa12.6□□□□□ -0.39
SMPD4-213ENST00000454468 MED7O43513 233 aa12.6□□□□□ -0.39
SMPD4-213ENST00000454468 HBP1O60381 514 aa12.6□□□□□ -0.39
SMPD4-213ENST00000454468 ASS1P00966 412 aaKnown RBP12.6□□□□□ -0.39
SMPD4-213ENST00000454468 CD48P09326 243 aa12.6□□□□□ -0.39
SMPD4-213ENST00000454468 PECAM1P16284 738 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-213ENST00000454468 ADORA2AP29274 412 aa12.6□□□□□ -0.39
SMPD4-213ENST00000454468 ATP5DP30049 168 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms