RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TNNI1P19237 187 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 LHX1P48742 406 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 PRKCQQ04759 706 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 CYP24A1Q07973 514 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 SNW1Q13573 536 aaKnown RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 PSMD6Q15008 389 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 TEAD2Q15562 447 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 MLF2Q15773 248 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 NFE2Q16621 373 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 SLC44A4Q53GD3 710 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 ARHGAP15Q53QZ3 475 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 DNAJB7Q7Z6W7 309 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 ALYREFQ86V81 257 aaKnown RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 C12orf56Q8IXR9 622 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 ADGRF2Q8IZF7 708 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 TOP6BLQ8N6T0 577 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 SHKBP1Q8TBC3 707 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 ZSCAN18Q8TBC5 510 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 HPDLQ96IR7 371 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 FAM84AQ96KN4 292 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 ASB16Q96NS5 453 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 GCNAQ96QF7 691 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 CGRRF1Q99675 332 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 ACBD6Q9BR61 282 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 DDX43Q9NXZ2 648 aaKnown RBP11.48□□□□□ -0.57
DDX39A-203ENST00000454233 HPSEQ9Y251 543 aa11.48□□□□□ -0.57
DDX39A-203ENST00000454233 PTPRJQ12913 1337 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 KLRC4O43908 158 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
DDX39A-203ENST00000454233 FCARP24071 287 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 GABRR2P28476 465 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 PCSK1P29120 753 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 MRE11P49959 708 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 CDR1P51861 262 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 STARD6P59095 220 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 DPH6Q7L8W6 267 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 TRAPPC11Q7Z392 1133 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 LRRTM3Q86VH5 581 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 TMC8Q8IU68 726 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 CCDC105Q8IYK2 499 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 FSIP1Q8NA03 581 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 DEPDC1BQ8WUY9 529 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 E2F7Q96AV8 911 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 CCDC127Q96BQ5 260 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 CHAMP1Q96JM3 812 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 ZSWIM3Q96MP5 696 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 LPIN3Q9BQK8 851 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 TRMT61BQ9BVS5 477 aaKnown RBP11.47□□□□□ -0.57
DDX39A-203ENST00000454233 LRRC3Q9BY71 257 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 PLA2G2FQ9BZM2 168 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 ATXN3LQ9H3M9 355 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 BRD9Q9H8M2 597 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 SIT1Q9Y3P8 196 aa11.47□□□□□ -0.57
DDX39A-203ENST00000454233 A0A1W2PQ27 194 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 A0A1W2PQ64 194 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 A0A1W2PQD8 194 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 KANSL1LA0AUZ9 987 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 DPYSL4O14531 572 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 KIF20AO95235 890 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 RPN1P04843 607 aaKnown RBP11.46□□□□□ -0.57
DDX39A-203ENST00000454233 PSMC3P17980 439 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 ATF6P18850 670 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 ACAT1P24752 427 aaKnown RBP11.46□□□□□ -0.57
DDX39A-203ENST00000454233 CDC25CP30307 473 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 NDUFA8P51970 172 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 RPL10AP62906 217 aaKnown RBP11.46□□□□□ -0.57
DDX39A-203ENST00000454233 STK4Q13043 487 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 TRPC3Q13507 836 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 GRM2Q14416 872 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 SOWAHAQ2M3V2 549 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 INTS6LQ5JSJ4 861 aaKnown RBP11.46□□□□□ -0.57
DDX39A-203ENST00000454233 POTEHQ6S545 545 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 VITQ6UXI7 678 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 YAF2Q8IY57 180 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 PJA1Q8NG27 643 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 GIPC2Q8TF65 315 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 DNASE1L2Q92874 299 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 IRF7Q92985 503 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 MMS19Q96T76 1030 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 PI4K2AQ9BTU6 479 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 TRPV4Q9HBA0 871 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 ZNF334Q9HCZ1 680 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-203ENST00000454233 ABCB6Q9NP58 842 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 FAM86C1Q9NVL1 165 aa11.46□□□□□ -0.57
DDX39A-203ENST00000454233 PIEZO1Q92508 2521 aa11.46□□□□□ -0.58
DDX39A-203ENST00000454233 CACNA1HO95180 2353 aa11.46□□□□□ -0.58
DDX39A-203ENST00000454233 FAM237AA0A1B0GTK4 181 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 HEPACAM2A8MVW5 462 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 NRG2O14511 850 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-203ENST00000454233 GABRDO14764 452 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 ZNF263O14978 683 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 PHACTR2O75167 634 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 CLSTN1O94985 981 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 DCNP07585 359 aaKnown RBP11.45□□□□□ -0.58
DDX39A-203ENST00000454233 CSH1P0DML2 217 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms