RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DLGAP2Q9P1A6 1054 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
CHD3-206ENST00000452447 NCAM2O15394 837 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 LRRN2O75325 713 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 TNNC2P02585 160 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 GLULP15104 373 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 GABRR2P28476 465 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 GDI1P31150 447 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 DNM1Q05193 864 aaKnown RBP13.87□□□□□ -0.19
CHD3-206ENST00000452447 MYO1EQ12965 1108 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 ARHGAP15Q53QZ3 475 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 RESP18Q5W5W9 173 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 ZNF852Q6ZMS4 543 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 LRRTM3Q86VH5 581 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 MFSD6LQ8IWD5 586 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 YAF2Q8IY57 180 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 TMEM86AQ8N2M4 240 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 ZNF507Q8TCN5 953 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 NKD2Q969F2 451 aaPredicted RBP13.87□□□□□ -0.19
CHD3-206ENST00000452447 GCNAQ96QF7 691 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 LPIN3Q9BQK8 851 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 OSBPL6Q9BZF3 934 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 BLZF1Q9H2G9 400 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 LTB4R2Q9NPC1 389 aa13.87□□□□□ -0.19
CHD3-206ENST00000452447 MRPS17Q9Y2R5 130 aaKnown RBP13.87□□□□□ -0.19
CHD3-206ENST00000452447 SPTBN4Q9H254 2564 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 TICRRQ7Z2Z1 1910 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 ZNF263O14978 683 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 HOXD13P35453 343 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 AFMP43652 599 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 MYL7Q01449 175 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
CHD3-206ENST00000452447 DUOXA2Q1HG44 320 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 LMBRD2Q68DH5 695 aaPredicted RBP13.86□□□□□ -0.19
CHD3-206ENST00000452447 VITQ6UXI7 678 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 GAREM2Q75VX8 874 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 CBWD2Q8IUF1 395 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 PDCL2Q8N4E4 241 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 ACBD6Q9BR61 282 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 ZNF334Q9HCZ1 680 aaPredicted RBP13.86□□□□□ -0.19
CHD3-206ENST00000452447 INTS13Q9NVM9 706 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 L1RE1Q9UN81 338 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 MTF2Q9Y483 593 aaPredicted RBP13.86□□□□□ -0.19
CHD3-206ENST00000452447 PCDHB5Q9Y5E4 795 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 SNX9Q9Y5X1 595 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 GVINP1Q7Z2Y8 2422 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 UBE4BO95155 1302 aa13.86□□□□□ -0.19
CHD3-206ENST00000452447 COL4A3Q01955 1670 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 HEPACAM2A8MVW5 462 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 MAN2B1O00754 1011 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 DPYSL4O14531 572 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
CHD3-206ENST00000452447 ATF6P18850 670 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 CASP1P29466 404 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 CDC25CP30307 473 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 MAGEA9P43362 315 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 SNRPFP62306 86 aaKnown RBP13.85□□□□□ -0.19
CHD3-206ENST00000452447 STXBP5Q5T5C0 1151 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 EPM2AIP1Q7L775 607 aaPredicted RBP13.85□□□□□ -0.19
CHD3-206ENST00000452447 ASCL5Q7RTU5 278 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 NELFCDQ8IXH7 590 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 RDH13Q8NBN7 331 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 CXorf38Q8TB03 319 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 GIPC2Q8TF65 315 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 FAM84AQ96KN4 292 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 AGPAT3Q9NRZ7 376 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 SPATA6Q9NWH7 488 aaPredicted RBP13.85□□□□□ -0.19
CHD3-206ENST00000452447 GDAP2Q9NXN4 497 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 DDX43Q9NXZ2 648 aaKnown RBP13.85□□□□□ -0.19
CHD3-206ENST00000452447 RCOR1Q9UKL0 485 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 DENND4CQ5VZ89 1909 aa13.85□□□□□ -0.19
CHD3-206ENST00000452447 NUP210Q8TEM1 1887 aaPredicted RBP13.84□□□□□ -0.19
CHD3-206ENST00000452447 FANCMQ8IYD8 2048 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 PVALEFA0A1B0GWK0 134 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 PRR23AA6NEV1 266 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 PRPF40AO75400 957 aaKnown RBP13.84□□□□□ -0.19
CHD3-206ENST00000452447 TNNI1P19237 187 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 TARSP26639 723 aaKnown RBP13.84□□□□□ -0.19
CHD3-206ENST00000452447 LHX1P48742 406 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 CYP2J2P51589 502 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 SNRNP35Q16560 246 aaKnown RBP13.84□□□□□ -0.19
CHD3-206ENST00000452447 GPR158Q5T848 1215 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 WDR49Q8IV35 697 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 ARID3BQ8IVW6 561 aaPredicted RBP13.84□□□□□ -0.19
CHD3-206ENST00000452447 ADGRF2Q8IZF7 708 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 TOP6BLQ8N6T0 577 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 OR5B17Q8NGF7 314 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 SPATA18Q8TC71 538 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 SCFD1Q8WVM8 642 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 HPDLQ96IR7 371 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 FNBP1Q96RU3 617 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 PI4K2AQ9BTU6 479 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 SLC39A2Q9NP94 309 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 TRPV5Q9NQA5 729 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 SIX4Q9UIU6 781 aa13.84□□□□□ -0.19
CHD3-206ENST00000452447 CLIC2O15247 247 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 TGFB1I1O43294 461 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 LAMTOR5O43504 91 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms