RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 BLZF1Q9H2G9 400 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 AGPAT3Q9NRZ7 376 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 TMLHEQ9NVH6 421 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
CPSF4-208ENST00000452047 KIF26AQ9ULI4 1882 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-208ENST00000452047 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-208ENST00000452047 F5P12259 2224 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 DMXL1Q9Y485 3027 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 PVALEFA0A1B0GWK0 134 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 ZNF233A6NK53 670 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
CPSF4-208ENST00000452047 GFRA3O60609 400 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 TMEM191BP0C7N4 346 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 PSMC3P17980 439 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 CD72P21854 359 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 VIPR2P41587 438 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 TUFMP49411 452 aaKnown RBP13.42□□□□□ -0.26
CPSF4-208ENST00000452047 RBP5P82980 135 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 BFSP1Q12934 665 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 CUL4BQ13620 913 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 MGAT5BQ3V5L5 792 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 TPRG1Q6ZUI0 275 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 FRMD5Q7Z6J6 570 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 GRAMD1CQ8IYS0 662 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 TMEM86AQ8N2M4 240 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 DEPDC1BQ8WUY9 529 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 LEO1Q8WVC0 666 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-208ENST00000452047 RSPRY1Q96DX4 576 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 PKMYT1Q99640 499 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 TRMT61BQ9BVS5 477 aaKnown RBP13.42□□□□□ -0.26
CPSF4-208ENST00000452047 OSBPL6Q9BZF3 934 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 SLITRK6Q9H5Y7 841 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 BRD9Q9H8M2 597 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 IL21Q9HBE4 155 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 KIAA1586Q9HCI6 787 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 LTB4R2Q9NPC1 389 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 TRPV5Q9NQA5 729 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 HEBP1Q9NRV9 189 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 ABI2Q9NYB9 513 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-208ENST00000452047 ZDHHC9Q9Y397 364 aa13.42□□□□□ -0.26
CPSF4-208ENST00000452047 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
CPSF4-208ENST00000452047 PTPRDP23468 1912 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 DCHS1Q96JQ0 3298 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 PRR23AA6NEV1 266 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 HEPACAM2A8MVW5 462 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 ARNTLO00327 626 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 GABRDO14764 452 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 HUS1O60921 280 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 FGF19O95750 216 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 KRT19P08727 400 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SLFN14P0C7P3 912 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 HAPLN1P10915 354 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 GABRR2P28476 465 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 AFMP43652 599 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SNRPFP62306 86 aaKnown RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 TSPY1Q01534 308 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 UBXN2BQ14CS0 331 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 VEPH1Q14D04 833 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SURF1Q15526 300 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SNRNP35Q16560 246 aaKnown RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 ASCL5Q7RTU5 278 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 LIMS2Q7Z4I7 341 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 WDR49Q8IV35 697 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 C1orf210Q8IVY1 113 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 MFSD6LQ8IWD5 586 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 NELFCDQ8IXH7 590 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 DCP1BQ8IZD4 617 aaKnown RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SPATA18Q8TC71 538 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 IRF7Q92985 503 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 ANKRD36BP1Q96IX9 119 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 ACBD6Q9BR61 282 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 GZF1Q9H116 711 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SLC39A2Q9NP94 309 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 PCDHB5Q9Y5E4 795 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 SNX9Q9Y5X1 595 aa13.41□□□□□ -0.26
CPSF4-208ENST00000452047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-208ENST00000452047 FAM170BA6NMN3 283 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 CLIC2O15247 247 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 HCRTO43612 131 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 KLRC4O43908 158 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 TNNC2P02585 160 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 PFKFB1P16118 471 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 HMGA1P17096 107 aaKnown RBP13.4□□□□□ -0.26
CPSF4-208ENST00000452047 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
CPSF4-208ENST00000452047 GDI1P31150 447 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 CYP24A1Q07973 514 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 NFE2Q16621 373 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-208ENST00000452047 CCDC142Q17RM4 750 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 DUOXA2Q1HG44 320 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 SOWAHAQ2M3V2 549 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms