RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 TRIP10Q15642 601 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PDK4Q16654 411 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RBM44Q6ZP01 1051 aaKnown RBP12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 NIM1KQ8IY84 436 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RTKN2Q8IZC4 609 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 MTBPQ96DY7 904 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 GCNAQ96QF7 691 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 GRIP2Q9C0E4 1043 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 TMEM39BQ9GZU3 492 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 APPL1Q9UKG1 709 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PHF24Q9UPV7 400 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 NAV1Q8NEY1 1877 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
RAB11FIP3-205ENST00000450428 CFBP00751 764 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ARL4CP56559 192 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 JAG1P78504 1218 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 MED21Q13503 144 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PEX6Q13608 980 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PDE1CQ14123 709 aaPredicted RBP12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 STAT4Q14765 748 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 MMEL1Q495T6 779 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ATP13A4Q4VNC1 1196 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 DCAF4Q8WV16 495 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 CPA5Q8WXQ8 436 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 YIPF2Q9BWQ6 316 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 WNT8AQ9H1J5 351 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 GINM1Q9NU53 330 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 LAMB1P07942 1786 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 BOLA2-SMG1P6H3BVE0 249 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 TP73O15350 636 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ITGA2BP08514 1039 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 FAM163BP0C2L3 166 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 BCRP11274 1271 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ASPHQ12797 758 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RASA2Q15283 850 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SYDE2Q5VT97 1194 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 NOP9Q86U38 636 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ATL2Q8NHH9 583 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 CCDC110Q8TBZ0 833 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ACER1Q8TDN7 264 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 MECRQ9BV79 373 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ANO3Q9BYT9 981 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 WHRNQ9P202 907 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 STX18Q9P2W9 335 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 BLOC1S6Q9UL45 172 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ADGRA3Q8IWK6 1321 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PDXKO00764 312 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 DKC1O60832 514 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 EYA4O95677 639 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 GRIA2P42262 883 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SLC12A3P55017 1021 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SLC45A4Q5BKX6 768 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 CFAP57Q96MR6 1250 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 MRIQ9BWK5 157 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 MANSC1Q9H8J5 431 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RMI1Q9H9A7 625 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
RAB11FIP3-205ENST00000450428 TGFB1I1O43294 461 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ZWINTO95229 277 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 NELFEP18615 380 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ABCD1P33897 745 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 CDK7P50613 346 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 AQP4P55087 323 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 MARSP56192 900 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 DLG1Q12959 904 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 TFDP1Q14186 410 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SIX1Q15475 284 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 BBS9Q3SYG4 887 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ODR4Q5SWX8 454 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SCUBE1Q8IWY4 988 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RBM15BQ8NDT2 890 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 HSPBAP1Q96EW2 488 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RABGAP1Q9Y3P9 1069 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ENTPD3O75355 529 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 IMPDH2P12268 514 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ALAS1P13196 640 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ARSEP51690 589 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 AP2B1P63010 937 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ALCAMQ13740 583 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 SFT2D3Q587I9 215 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 RABGAP1LQ5R372 815 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PPP1R18Q6NYC8 613 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 TATDN1Q6P1N9 297 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 ARID3BQ8IVW6 561 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 PLVAPQ9BX97 442 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 GPR88Q9GZN0 384 aa12.66□□□□□ -0.38
RAB11FIP3-205ENST00000450428 FAM192AQ9GZU8 254 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms