RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 PTPRDP23468 1912 aa12.8□□□□□ -0.36
LSP1P3-201ENST00000449530 CFAP54Q96N23 3096 aa12.8□□□□□ -0.36
LSP1P3-201ENST00000449530 OBSL1O75147 1896 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 AKAP3O75969 853 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 CST3P01034 146 aaPredicted RBP12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 TRIM49P0CI25 452 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 TRIM49CP0CI26 452 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 RPL13P26373 211 aaKnown RBP12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 AP3M2P53677 418 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 EPHB3P54753 998 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 PSMC1P62191 440 aaKnown RBP12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 UBE2HP62256 183 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 TNNC1P63316 161 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 FOXK2Q01167 660 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 TDGQ13569 410 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 HTR4Q13639 388 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 NFIL3Q16649 462 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 ZNF699Q32M78 642 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 EDRF1Q3B7T1 1238 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 PRSS36Q5K4E3 855 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 FAM186BQ8IYM0 893 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 UBALD2Q8IYN6 164 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 SPATA20Q8TB22 786 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 KBTBD7Q8WVZ9 684 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 TCEAL4Q96EI5 215 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 TSG101Q99816 390 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 DNAJC25Q9H1X3 360 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 AVENQ9NQS1 362 aaPredicted RBP12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 TMLHEQ9NVH6 421 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 IGSF9Q9P2J2 1179 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 NXF1Q9UBU9 619 aaKnown RBP12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 NUMBLQ9Y6R0 609 aa12.79□□□□□ -0.36
LSP1P3-201ENST00000449530 NRG2O14511 850 aaPredicted RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 MAPK13O15264 365 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 NARSO43776 548 aaKnown RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 KRT13P13646 458 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 ATF6P18850 670 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 WARSP23381 471 aaKnown RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 PCSK1P29120 753 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 PSMC2P35998 433 aaKnown RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 CCR2P41597 374 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 PIK3CAP42336 1068 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 LHX1P48742 406 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 VAMP7P51809 220 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 CLDN10P78369 228 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 ADAM9Q13443 819 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 NCOA4Q13772 614 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 VEPH1Q14D04 833 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 C1orf220Q5T0J3 134 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 CYP4A22Q5TCH4 519 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 SCARA5Q6ZMJ2 495 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 HFE2Q6ZVN8 426 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 INTS8Q75QN2 995 aaKnown RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 SPPL2BQ8TCT7 592 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 SYAP1Q96A49 352 aaPredicted RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 ELMO3Q96BJ8 720 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 EEF2KMTQ96G04 330 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 PHOX2BQ99453 314 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 LPIN3Q9BQK8 851 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 SYT15Q9BQS2 421 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 ACBD6Q9BR61 282 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 MRPL45Q9BRJ2 306 aaKnown RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 PI4K2AQ9BTU6 479 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 HSFX1Q9UBD0 423 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 DUSP12Q9UNI6 340 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 NUP210Q8TEM1 1887 aaPredicted RBP12.78□□□□□ -0.36
LSP1P3-201ENST00000449530 TRIM49BA6NDI0 452 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 ANHXE9PGG2 379 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 BIN1O00499 593 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 ZNF197O14709 1029 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 GABRDO14764 452 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 VNN1O95497 513 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 C4BPAP04003 597 aaKnown RBP12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 HAPLN1P10915 354 aaPredicted RBP12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 GJA1P17302 382 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 ATICP31939 592 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 GPR15P49685 360 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 PMS1P54277 932 aaKnown RBP12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 EPHA5P54756 1037 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 SMARCB1Q12824 385 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 NFE2Q16621 373 aaPredicted RBP12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 ZACNQ401N2 412 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 COBLL1Q53SF7 1204 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 PARM1Q6UWI2 310 aa12.77□□□□□ -0.37
LSP1P3-201ENST00000449530 MTSS1LQ765P7 747 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms