RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GSDMAQ96QA5 445 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 HAPLN2Q9GZV7 340 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 MRPL44Q9H9J2 332 aaKnown RBP14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 TBX20Q9UMR3 447 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 ASB3Q9Y575 518 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 SHISA7A6NL88 538 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 LILRB5O75023 590 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 PRPF6O94906 941 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 GCNT3O95395 438 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 CD44P16070 742 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 SDHBP21912 280 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 GDI1P31150 447 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 SPAG1Q07617 926 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 KCNA1Q09470 495 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 DUSP4Q13115 394 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 GRM2Q14416 872 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 DPCR1Q3MIW9 517 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 SPATA1Q5VX52 437 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 ARMCX5Q6P1M9 558 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 VITQ6UXI7 678 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 DGLUCYQ7Z3D6 616 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 DCLK2Q8N568 766 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 ZSCAN18Q8TBC5 510 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 FAM3CQ92520 227 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 CCDC47Q96A33 483 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 ZSWIM3Q96MP5 696 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 CHRDQ9H2X0 955 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 NCDNQ9UBB6 729 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 HSFX1Q9UBD0 423 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 TIMM13Q9Y5L4 95 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 PATJQ8NI35 1801 aa14.84□□□□□ -0.03
PDLIM2-213ENST00000448520 A0A0B4J269 797 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 HNRNPDLO14979 420 aaKnown RBP14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 PPP1R37O75864 691 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 FGF19O95750 216 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 HOXD13P35453 343 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 TNFSF9P41273 254 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 LILRA4P59901 499 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 ENOX2Q16206 610 aaKnown RBP14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 ZNF658Q5TYW1 1059 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 OVOS1Q6IE37 1185 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 CENPPQ6IPU0 288 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 ZNF720Q7Z2F6 126 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 NELFCDQ8IXH7 590 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 YAF2Q8IY57 180 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 ZNF687Q8N1G0 1237 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 MSANTD3Q96H12 275 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 EPC1Q9H2F5 836 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 SLITRK6Q9H5Y7 841 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 LMAN1LQ9HAT1 526 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 PRMT8Q9NR22 394 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 OLFML3Q9NRN5 406 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 RMND1Q9NWS8 449 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 SEL1LQ9UBV2 794 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 NDRG2Q9UN36 371 aaKnown RBP14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 DERAQ9Y315 318 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 YIPF1Q9Y548 306 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 CACNA1AO00555 2505 aa14.83□□□□□ -0.04
PDLIM2-213ENST00000448520 HEPACAM2A8MVW5 462 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 CHADO15335 359 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 VIPR2P41587 438 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 PRCPP42785 496 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 TUFMP49411 452 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 NLRP12P59046 1061 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 POU5F1Q01860 360 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 TYRO3Q06418 890 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 MTAPQ13126 283 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 TEAD2Q15562 447 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 SLFN12LQ6IEE8 588 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 C11orf57Q6ZUT1 292 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 EPM2AIP1Q7L775 607 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 DNAJB7Q7Z6W7 309 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 ITIH5Q86UX2 942 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 SHKBP1Q8TBC3 707 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 CSGALNACT1Q8TDX6 532 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 SCFD1Q8WVM8 642 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 SENP8Q96LD8 212 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 PGLYRP2Q96PD5 576 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 FUCA2Q9BTY2 467 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 STRA6Q9BX79 667 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 LRRC3Q9BY71 257 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 C8orf33Q9H7E9 229 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 DLL3Q9NYJ7 618 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 PIAS3Q9Y6X2 628 aa14.82□□□□□ -0.04
PDLIM2-213ENST00000448520 PPP1R3GB7ZBB8 358 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 TISP43B9A030 160 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 PIRO00625 290 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 FAM189A1O60320 539 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 VNN2O95498 520 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 ODC1P11926 461 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 GJA1P17302 382 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 CCR3P51677 355 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 GTF2BQ00403 316 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 SMARCB1Q12824 385 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 PSMD2Q13200 908 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 KLHL10Q6JEL2 608 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 SASS6Q6UVJ0 657 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 FAM212AQ96EL1 285 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 MSTO1Q9BUK6 570 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 DNAJC25Q9H1X3 360 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms