RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IL21Q9HBE4 155 aa30.51■■■□□ 2.47
CBX4-202ENST00000448310 NCDNQ9UBB6 729 aa30.51■■■□□ 2.47
CBX4-202ENST00000448310 MTMR6Q9Y217 621 aa30.51■■■□□ 2.47
CBX4-202ENST00000448310 OBSL1O75147 1896 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 CACNA1AO00555 2505 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 CHRNB1P11230 501 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 POLR2BP30876 1174 aaKnown RBP30.5■■■□□ 2.47
CBX4-202ENST00000448310 SCARA3Q6AZY7 606 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 CCDC73Q6ZRK6 1079 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 ERMP1Q7Z2K6 904 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 BRSK2Q8IWQ3 736 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 ZNF560Q96MR9 790 aa30.5■■■□□ 2.47
CBX4-202ENST00000448310 SMG5Q9UPR3 1016 aaKnown RBP30.5■■■□□ 2.47
CBX4-202ENST00000448310 GOLGA8IPA6NC78 632 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 GOLGA8JA6NMD2 632 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 ITGB3P05106 788 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 HAPLN1P10915 354 aaPredicted RBP30.49■■■□□ 2.47
CBX4-202ENST00000448310 TDGF1P13385 188 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 TAF12Q16514 161 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 NT5DC4Q86YG4 428 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 SYCP3Q8IZU3 236 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 SPPL2BQ8TCT7 592 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 NOC3LQ8WTT2 800 aaKnown RBP30.49■■■□□ 2.47
CBX4-202ENST00000448310 SMG9Q9H0W8 520 aaKnown RBP30.49■■■□□ 2.47
CBX4-202ENST00000448310 TASP1Q9H6P5 420 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 OLFML3Q9NRN5 406 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 RBM12Q9NTZ6 932 aaKnown RBP30.49■■■□□ 2.47
CBX4-202ENST00000448310 TMLHEQ9NVH6 421 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 GTSE1Q9NYZ3 720 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 AGAP1Q9UPQ3 857 aa30.49■■■□□ 2.47
CBX4-202ENST00000448310 GAS6Q14393 721 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 SLC39A14Q15043 492 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 TXNDC11Q6PKC3 985 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 PDILTQ8N807 584 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 C1orf127Q8N9H9 656 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 STKLD1Q8NE28 680 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 C2orf15Q8WU43 125 aaKnown RBP30.48■■■□□ 2.47
CBX4-202ENST00000448310 GCNAQ96QF7 691 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 CBWD1Q9BRT8 395 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 EPC1Q9H2F5 836 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 PANK4Q9NVE7 773 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 RBAKQ9NYW8 714 aaPredicted RBP30.48■■■□□ 2.47
CBX4-202ENST00000448310 PCDHB13Q9Y5F0 798 aa30.48■■■□□ 2.47
CBX4-202ENST00000448310 FRMD3A2A2Y4 597 aa30.47■■■□□ 2.47
CBX4-202ENST00000448310 CDC25CP30307 473 aa30.47■■■□□ 2.47
CBX4-202ENST00000448310 ARHGAP29Q52LW3 1261 aa30.47■■■□□ 2.47
CBX4-202ENST00000448310 WDR44Q5JSH3 913 aa30.47■■■□□ 2.47
CBX4-202ENST00000448310 DCP1BQ8IZD4 617 aaKnown RBP30.47■■■□□ 2.47
CBX4-202ENST00000448310 PCIF1Q9H4Z3 704 aa30.47■■■□□ 2.47
CBX4-202ENST00000448310 C8orf33Q9H7E9 229 aaPredicted RBP30.47■■■□□ 2.47
CBX4-202ENST00000448310 SPECC1L-ADORA2AF8WAN1 911 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 PRPF6O94906 941 aaKnown RBP30.46■■■□□ 2.47
CBX4-202ENST00000448310 GARTP22102 1010 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 GPR15P49685 360 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 MLLT6P55198 1093 aaPredicted RBP30.46■■■□□ 2.47
CBX4-202ENST00000448310 SATB1Q01826 763 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 SMARCB1Q12824 385 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 PDCL2Q8N4E4 241 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 IER2Q9BTL4 223 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 PI4K2AQ9BTU6 479 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 SLC46A2Q9BY10 475 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 FAM126AQ9BYI3 521 aaPredicted RBP30.46■■■□□ 2.47
CBX4-202ENST00000448310 OBP2AQ9NY56 170 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 L1RE1Q9UN81 338 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 PCDHB5Q9Y5E4 795 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 DNAH14Q0VDD8 3507 aa30.46■■■□□ 2.47
CBX4-202ENST00000448310 CTHP32929 405 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 PNPLA4P41247 253 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 CCR3P51677 355 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 TNK2Q07912 1038 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 BFSP1Q12934 665 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 MAMSTRQ6ZN01 415 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 BPIFB1Q8TDL5 484 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 MSANTD3Q96H12 275 aa30.45■■■□□ 2.47
CBX4-202ENST00000448310 INTS4Q96HW7 963 aaKnown RBP30.45■■■□□ 2.47
CBX4-202ENST00000448310 MYBPHLA2RUH7 354 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 LDHAP00338 332 aaKnown RBP30.44■■■□□ 2.46
CBX4-202ENST00000448310 ACAT1P24752 427 aaKnown RBP30.44■■■□□ 2.46
CBX4-202ENST00000448310 TSPY1Q01534 308 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 ALCAMQ13740 583 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 SDHAF4Q5VUM1 108 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 Q6ZS52 159 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 TMEM150AQ86TG1 271 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 CXorf38Q8TB03 319 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 CACTINQ8WUQ7 758 aaKnown RBP30.44■■■□□ 2.46
CBX4-202ENST00000448310 PDE11AQ9HCR9 933 aa30.44■■■□□ 2.46
CBX4-202ENST00000448310 MORC2Q9Y6X9 1032 aaPredicted RBP30.44■■■□□ 2.46
CBX4-202ENST00000448310 EXTL3O43909 919 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 PRPF40AO75400 957 aaKnown RBP30.43■■■□□ 2.46
CBX4-202ENST00000448310 KRT19P08727 400 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 HMGA1P17096 107 aaKnown RBP30.43■■■□□ 2.46
CBX4-202ENST00000448310 WEE1P30291 646 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 CXCL12P48061 93 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 LRRC32Q14392 662 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 PPP2R5DQ14738 602 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 LMBRD2Q68DH5 695 aaPredicted RBP30.43■■■□□ 2.46
CBX4-202ENST00000448310 RALGPS2Q86X27 583 aaPredicted RBP30.43■■■□□ 2.46
CBX4-202ENST00000448310 CSGALNACT2Q8N6G5 542 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 GLIS3Q8NEA6 775 aa30.43■■■□□ 2.46
CBX4-202ENST00000448310 HPS3Q969F9 1004 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms