RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 MIIPQ5JXC2 388 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 C10orf76Q5T2E6 689 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 RASIP1Q5U651 963 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 LONP2Q86WA8 852 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 KLHL7Q8IXQ5 586 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 ALDH16A1Q8IZ83 802 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 C7orf31Q8N865 590 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 TRAPPC12Q8WVT3 735 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 GFM2Q969S9 779 aaKnown RBP13.83□□□□□ -0.2
DDX56-206ENST00000446987 VWCEQ96DN2 955 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 CATSPER2Q96P56 530 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
DDX56-206ENST00000446987 ROPN1BQ9BZX4 212 aaPredicted RBP13.83□□□□□ -0.2
DDX56-206ENST00000446987 ROPN1Q9HAT0 212 aaPredicted RBP13.83□□□□□ -0.2
DDX56-206ENST00000446987 TBCCD1Q9NVR7 557 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 SPATA7Q9P0W8 599 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 SIK3Q9Y2K2 1263 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 SH3GLB1Q9Y371 365 aa13.83□□□□□ -0.2
DDX56-206ENST00000446987 UTP11Q9Y3A2 253 aaKnown RBP13.83□□□□□ -0.2
DDX56-206ENST00000446987 LAMA2P24043 3122 aaKnown RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 MBLAC1A4D2B0 266 aaPredicted RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 TMEM150BA6NC51 233 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 TREHO43280 583 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 PLEKP08567 350 aaPredicted RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 USP46P62068 366 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 PRKCEQ02156 737 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 CBX3Q13185 183 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 ITGA9Q13797 1035 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 RCN2Q14257 317 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 LIN52Q52LA3 116 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 DENND2CQ68D51 928 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 ARMCX6Q7L4S7 300 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 ZNF554Q86TJ5 538 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 LRRC8CQ8TDW0 803 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 DDX27Q96GQ7 796 aaKnown RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 FMO2Q99518 471 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.29e-8■■■□□ 14.7
DDX56-206ENST00000446987 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 AZI2Q9H6S1 392 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 METTL14Q9HCE5 456 aaKnown RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 TTC7AQ9ULT0 858 aaPredicted RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 PCDHA12Q9UN75 941 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 NUB1Q9Y5A7 615 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 TET1Q8NFU7 2136 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 PABPC4LP0CB38 370 aaKnown RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 INSRRP14616 1297 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 CCNE1P24864 410 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 SLC26A2P50443 739 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
DDX56-206ENST00000446987 RPS6KA1Q15418 735 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 GRIK4Q16099 956 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 FAM160B1Q5W0V3 765 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 SERINC5Q86VE9 423 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 EXOC3L1Q86VI1 746 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 NELFCDQ8IXH7 590 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 UCMAQ8WVF2 138 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 PCMTD1Q96MG8 357 aaPredicted RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 MTRQ99707 1265 aa13.82□□□□□ -0.2
DDX56-206ENST00000446987 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 BARX2Q9UMQ3 279 aaPredicted RBP13.82□□□□□ -0.2
DDX56-206ENST00000446987 LAMA3Q16787 3333 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 LOXHD1Q8IVV2 1947 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 SMIM31A0A1B0GVY4 71 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 POTEB3A0JP26 581 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 C17orf102A2RUQ5 167 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 MYBL1P10243 752 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 PIM1P11309 404 aaPredicted RBP13.81□□□□□ -0.2
DDX56-206ENST00000446987 ATP5DP30049 168 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 FLT3P36888 993 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 YARSP54577 528 aaKnown RBP13.81□□□□□ -0.2
DDX56-206ENST00000446987 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
DDX56-206ENST00000446987 EPHA7Q15375 998 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 CLUL1Q15846 466 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 POTEBQ6S5H4 581 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 NME8Q8N427 588 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 CSGALNACT2Q8N6G5 542 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 PPFIBP2Q8ND30 876 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 CKAP2Q8WWK9 683 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 DYDC2Q96IM9 177 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 DUSP9Q99956 384 aaKnown RBP13.81□□□□□ -0.2
DDX56-206ENST00000446987 HSD17B14Q9BPX1 270 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 EPB41L4BQ9H329 900 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 PRO3102Q9H379 93 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 TMEM39AQ9NV64 488 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 TCEAL9Q9UHQ7 104 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 GDAQ9Y2T3 454 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 NRCAMQ92823 1304 aa13.81□□□□□ -0.2
DDX56-206ENST00000446987 FAM187AA6NFU0 413 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 TLR3O15455 904 aaKnown RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 ZNF189O75820 626 aaPredicted RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 TECP42680 631 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 SERPINB8P50452 374 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 PMS2P54278 862 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms