RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CIITAP33076 1130 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 ADARP55265 1226 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 ZNF556Q9HAH1 456 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 A8MXQ7 604 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 HDDC2Q7Z4H3 204 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 EIF2AK1Q9BQI3 630 aaKnown RBP19.42■□□□□ 0.7
SHANK3-203ENST00000445220 HSPBP1Q9NZL4 362 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 MYO1GB0I1T2 1018 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 MKRN4PQ13434 485 aaPredicted RBP19.42■□□□□ 0.7
SHANK3-203ENST00000445220 CCDC81Q6ZN84 652 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 SCFD1Q8WVM8 642 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 TSPAN17Q96FV3 270 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 EPAS1Q99814 870 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 ZNF302Q9NR11 478 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 SESN1Q9Y6P5 492 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 DYTNA2CJ06 578 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 KPNA4O00629 521 aaPredicted RBP19.42■□□□□ 0.7
SHANK3-203ENST00000445220 AHCYL1O43865 530 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 OTUD4Q01804 1114 aaKnown RBP19.42■□□□□ 0.7
SHANK3-203ENST00000445220 C16orf72Q14CZ0 275 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 SWT1Q5T5J6 900 aaKnown RBP19.42■□□□□ 0.7
SHANK3-203ENST00000445220 KLHDC7AQ5VTJ3 777 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 HAUS6Q7Z4H7 955 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 C2orf69Q8N8R5 385 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 STK32AQ8WU08 396 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 SHCBP1LQ9BZQ2 653 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 SYCP2LQ5T4T6 812 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 TLK2Q86UE8 772 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 OTUB1Q96FW1 271 aaPredicted RBP19.42■□□□□ 0.7
SHANK3-203ENST00000445220 VPS50Q96JG6 964 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 LXNQ9BS40 222 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 UBAP1Q9NZ09 502 aa19.42■□□□□ 0.7
SHANK3-203ENST00000445220 FAM196BA6NMK8 535 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 PLEKP08567 350 aaPredicted RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 FDPSP14324 419 aaKnown RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 NMT1P30419 496 aaKnown RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 BNC2Q6ZN30 1099 aaPredicted RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 ATXN2LQ8WWM7 1075 aaKnown RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 TRIM63Q969Q1 353 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 TRPC5OSA6NMA1 111 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 HEATR4Q86WZ0 1026 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 CPA5Q8WXQ8 436 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 OMA1Q96E52 524 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 MAP3K14Q99558 947 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 ZSWIM1Q9BR11 485 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 ACAD9Q9H845 621 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 EFCAB1Q9HAE3 211 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 MTMR4Q9NYA4 1195 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 WHRNQ9P202 907 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 USP32Q8NFA0 1604 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 MYMKA6NI61 221 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 SAC3D1A6NKF1 404 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 DUSP10Q9Y6W6 482 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 CD163L1Q9NR16 1453 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 UBA6A0AVT1 1052 aaPredicted RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 BLVRAP53004 296 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 ELF3P78545 371 aaPredicted RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 DMPKQ09013 629 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 RASA2Q15283 850 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 INAQ16352 499 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 FIGNQ5HY92 759 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 DSTYKQ6XUX3 929 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 LRRN4CLQ8ND94 238 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 PPHLN1Q8NEY8 458 aaKnown RBP19.41■□□□□ 0.7
SHANK3-203ENST00000445220 C18orf8Q96DM3 657 aa19.41■□□□□ 0.7
SHANK3-203ENST00000445220 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 MAP2K7O14733 419 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 KIAA0391O15091 583 aaKnown RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 TBX3O15119 743 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 KCNQ2O43526 872 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 CAMTA2O94983 1202 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 TRIM65Q6PJ69 517 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 LAYNQ6UX15 382 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 FAM162AQ96A26 154 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 PAIP1Q9H074 479 aaKnown RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 EPS8L2Q9H6S3 715 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 WDR70Q9NW82 654 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 RBAKQ9NYW8 714 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 FAM32AQ9Y421 112 aaKnown RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 RFC5P40937 340 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 HERVK_113P62684 666 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 Q3C1V9 767 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 MRPS26Q9BYN8 205 aaKnown RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 SNX13Q9Y5W8 968 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 FRMPD1Q5SYB0 1578 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 CCDC78A2IDD5 438 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 F8VZ95 297 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 GLI1P08151 1106 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 ZNF543Q08ER8 600 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 MXD4Q14582 209 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-203ENST00000445220 SLC15A2Q16348 729 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 ZNF568Q3ZCX4 644 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 MEI1Q5TIA1 1274 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 RINLQ6ZS11 566 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 DAPK2Q9UIK4 370 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 IQSEC2Q5JU85 1478 aa19.4■□□□□ 0.7
SHANK3-203ENST00000445220 SPATA31A1Q5TZJ5 1347 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms