RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ABI2Q9NYB9 513 aaPredicted RBP16.66■□□□□ 0.26
SEC13-213ENST00000445064 DLL3Q9NYJ7 618 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 SEL1LQ9UBV2 794 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 ZNF292O60281 2723 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 TSC2P49815 1807 aa16.66■□□□□ 0.26
SEC13-213ENST00000445064 GVINP1Q7Z2Y8 2422 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 MED19A0JLT2 244 aaPredicted RBP16.65■□□□□ 0.26
SEC13-213ENST00000445064 MYBPHLA2RUH7 354 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 GCNT3O95395 438 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 IDEP14735 1019 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 GAP43P17677 238 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 SYT1P21579 422 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 CDC25CP30307 473 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 CASP5P51878 434 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 TFAMQ00059 246 aaKnown RBP16.65■□□□□ 0.26
SEC13-213ENST00000445064 TNK2Q07912 1038 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 SMARCB1Q12824 385 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 RESTQ13127 1097 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 LPAL2Q16609 132 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
SEC13-213ENST00000445064 NT5DC4Q86YG4 428 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
SEC13-213ENST00000445064 SPPL2BQ8TCT7 592 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 BPIFB1Q8TDL5 484 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 C2orf15Q8WU43 125 aaKnown RBP16.65■□□□□ 0.26
SEC13-213ENST00000445064 OBP2AQ9NY56 170 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 AGAP1Q9UPQ3 857 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 EXOC7Q9UPT5 735 aa16.65■□□□□ 0.26
SEC13-213ENST00000445064 EP300Q09472 2414 aaPredicted RBP16.65■□□□□ 0.26
SEC13-213ENST00000445064 WDR87Q6ZQQ6 2873 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 DCHS1Q96JQ0 3298 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 GOLGA8IPA6NC78 632 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 GOLGA8JA6NMD2 632 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 ITGB3P05106 788 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 POLR2BP30876 1174 aaKnown RBP16.64■□□□□ 0.25
SEC13-213ENST00000445064 CTHP32929 405 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 TXLNAP40222 546 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 DMWDQ09019 674 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 LRRC32Q14392 662 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 PON2Q15165 354 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 C1orf228Q6PIY5 440 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 Q6ZS52 159 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 RALGPS2Q86X27 583 aaPredicted RBP16.64■□□□□ 0.25
SEC13-213ENST00000445064 SYCP3Q8IZU3 236 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 SPEM1Q8N4L4 309 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 GPR161Q8N6U8 529 aaKnown RBP16.64■□□□□ 0.25
SEC13-213ENST00000445064 NOC3LQ8WTT2 800 aaKnown RBP16.64■□□□□ 0.25
SEC13-213ENST00000445064 MSANTD3Q96H12 275 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 FAM84AQ96KN4 292 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 GCNAQ96QF7 691 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 PI4K2AQ9BTU6 479 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 FGFBP2Q9BYJ0 223 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 PCIF1Q9H4Z3 704 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 GKN1Q9NS71 199 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 PCDHB5Q9Y5E4 795 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 PCDHB13Q9Y5F0 798 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 TCHHQ07283 1943 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 FRYLO94915 3013 aa16.64■□□□□ 0.25
SEC13-213ENST00000445064 A0A087X0B3 334 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 CHURC1-FNTBB4DL54 471 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 PRPF40AO75400 957 aaKnown RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 LDHAP00338 332 aaKnown RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 F11P03951 625 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 HMGA1P17096 107 aaKnown RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 TGM1P22735 817 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 WEE1P30291 646 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 PNPLA4P41247 253 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 FNTBP49356 437 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 GPR15P49685 360 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 SDHAF4Q5VUM1 108 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 TMEM150AQ86TG1 271 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 BRSK2Q8IWQ3 736 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 CSGALNACT2Q8N6G5 542 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 CELF5Q8N6W0 485 aaKnown RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 MAB21L3Q8N8X9 362 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 C1orf127Q8N9H9 656 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 STKLD1Q8NE28 680 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 CACTINQ8WUQ7 758 aaKnown RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 ZNF560Q96MR9 790 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 PANK4Q9NVE7 773 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 THG1LQ9NWX6 298 aaKnown RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 RBAKQ9NYW8 714 aaPredicted RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 RAB23Q9ULC3 237 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 USP18Q9UMW8 372 aa16.63■□□□□ 0.25
SEC13-213ENST00000445064 MAGED2Q9UNF1 606 aaPredicted RBP16.63■□□□□ 0.25
SEC13-213ENST00000445064 HRO43593 1189 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 PRPF6O94906 941 aaKnown RBP16.62■□□□□ 0.25
SEC13-213ENST00000445064 GARTP22102 1010 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 ACAT1P24752 427 aaKnown RBP16.62■□□□□ 0.25
SEC13-213ENST00000445064 HOXC13P31276 330 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 STAT6P42226 847 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 NLRP12P59046 1061 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 SLC39A14Q15043 492 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 DDR2Q16832 855 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 DGKKQ5KSL6 1271 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 HEATR6Q6AI08 1181 aaKnown RBP16.62■□□□□ 0.25
SEC13-213ENST00000445064 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms