RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 STK39Q9UEW8 545 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 A8MXQ7 604 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 KRT5P13647 590 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 CYP11B1P15538 503 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 DSG1Q02413 1049 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 RAB30Q15771 203 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 ZNF394Q53GI3 561 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 METTL23Q86XA0 190 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 OR10T2Q8NGX3 314 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 LNX1Q8TBB1 728 aaPredicted RBP16.11■□□□□ 0.17
CCNE1-203ENST00000444983 EPS8L1Q8TE68 723 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 DDX1Q92499 740 aaKnown RBP16.11■□□□□ 0.17
CCNE1-203ENST00000444983 SAMD11Q96NU1 681 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 PKMYT1Q99640 499 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 HERC2P3Q9BVR0 1158 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 DPEP3Q9H4B8 488 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 ARHGAP20Q9P2F6 1191 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
CCNE1-203ENST00000444983 LZTS1Q9Y250 596 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 TRANK1O15050 2925 aa16.11■□□□□ 0.17
CCNE1-203ENST00000444983 A0A1W2PPC1 479 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 LILRB3O75022 631 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 CTNNB1P35222 781 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 USP8P40818 1118 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 BPIFB4P59827 614 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 SMAD3P84022 425 aaKnown RBP16.1■□□□□ 0.17
CCNE1-203ENST00000444983 KRT17Q04695 432 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 NOP9Q86U38 636 aaKnown RBP16.1■□□□□ 0.17
CCNE1-203ENST00000444983 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 SPPL3Q8TCT6 385 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 PIK3R5Q8WYR1 880 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 TFAP2BQ92481 460 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 TGS1Q96RS0 853 aaKnown RBP16.1■□□□□ 0.17
CCNE1-203ENST00000444983 MSRAQ9UJ68 235 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 KIAA1257Q9ULG3 409 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 CDH23Q9H251 3354 aa16.1■□□□□ 0.17
CCNE1-203ENST00000444983 CALCAP01258 141 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 SERPING1P05155 500 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 PDGFRBP09619 1106 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 SKILP12757 684 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ACAT1P24752 427 aaKnown RBP16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ARID5AQ03989 594 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 PTK2Q05397 1052 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ORC1Q13415 861 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ASIC2Q16515 512 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 RSPO2Q6UXX9 243 aaPredicted RBP16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ANKS3Q6ZW76 656 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ACOT1Q86TX2 421 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 VPS52Q8N1B4 723 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ZNF606Q8WXB4 792 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 TNIP3Q96KP6 325 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 CHP1Q99653 195 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ZBP1Q9H171 429 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 HAUS4Q9H6D7 363 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 CRTAC1Q9NQ79 661 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 CDH9Q9ULB4 789 aa16.09■□□□□ 0.17
CCNE1-203ENST00000444983 BZW2Q9Y6E2 419 aaKnown RBP16.09■□□□□ 0.17
CCNE1-203ENST00000444983 ATP2C2O75185 946 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 PLEKP08567 350 aaPredicted RBP16.08■□□□□ 0.17
CCNE1-203ENST00000444983 PCSK1P29120 753 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 GNA15P30679 374 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 UBE3AQ05086 875 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.17
CCNE1-203ENST00000444983 CAMK1Q14012 370 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 ASTE1Q2TB18 679 aaPredicted RBP16.08■□□□□ 0.17
CCNE1-203ENST00000444983 LRIT3Q3SXY7 679 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 LRRTM3Q86VH5 581 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 GPIHBP1Q8IV16 184 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 THEM5Q8N1Q8 247 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 C12orf29Q8N999 325 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 B3GALNT2Q8NCR0 500 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 OXCT2Q9BYC2 517 aaPredicted RBP16.08■□□□□ 0.17
CCNE1-203ENST00000444983 NKX2-4Q9H2Z4 354 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 MTRRQ9UBK8 725 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 BACE2Q9Y5Z0 518 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 IRAK3Q9Y616 596 aa16.08■□□□□ 0.17
CCNE1-203ENST00000444983 MYBPHLA2RUH7 354 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 H3BNC9 293 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 CTSAP10619 480 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 VDRP11473 427 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 CHRNB2P17787 502 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 PTPN1P18031 435 aaKnown RBP16.08■□□□□ 0.16
CCNE1-203ENST00000444983 DNAJB1P25685 340 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 DNAJB2P25686 324 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 GLUD2P49448 558 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 KLHL30Q0D2K2 578 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 INTS6LQ5JSJ4 861 aaKnown RBP16.08■□□□□ 0.16
CCNE1-203ENST00000444983 ARHGAP17Q68EM7 881 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 SLC8B1Q6J4K2 584 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 ZNF280DQ6N043 979 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 PRSS55Q6UWB4 352 aaPredicted RBP16.08■□□□□ 0.16
CCNE1-203ENST00000444983 ZNF571Q7Z3V5 609 aaPredicted RBP16.08■□□□□ 0.16
CCNE1-203ENST00000444983 ZNF677Q86XU0 584 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 HEXIM2Q96MH2 286 aaKnown RBP16.08■□□□□ 0.16
CCNE1-203ENST00000444983 TMEM209Q96SK2 561 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms