RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CMTR1Q8N1G2 835 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SRBD1Q8N5C6 995 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 PPM1NQ8N819 430 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TPCN2Q8NHX9 752 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZNF564Q8TBZ8 553 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 FNDC8Q8TC99 324 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CNDP1Q96KN2 507 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GJD4Q96KN9 370 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 YIPF2Q9BWQ6 316 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TRIM45Q9H8W5 580 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GPHNQ9NQX3 736 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 C1orf112Q9NSG2 853 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 EMILIN3Q9NT22 766 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GJB4Q9NTQ9 266 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZBTB1Q9Y2K1 713 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CDY2AQ9Y6F7 541 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CDY1Q9Y6F8 540 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZNF532Q9HCE3 1301 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 KAT6BQ8WYB5 2073 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 C2CD2LO14523 706 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TEX28O15482 410 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 LZTS3O60299 673 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SRP72O76094 671 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZBTB11O95625 1053 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TMEM253P0C7T8 217 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GAP43P17677 238 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 POLR2BP30876 1174 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 RPS6P62753 249 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SULT2A1Q06520 285 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 RALGDSQ12967 914 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZNF423Q2M1K9 1284 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SPOPLQ6IQ16 392 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 RFX6Q8HWS3 928 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SLC25A41Q8N5S1 370 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SUPT20HQ8NEM7 779 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 C1orf54Q8WWF1 131 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 NLRP4Q96MN2 994 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 DENND2DQ9H6A0 471 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 PCDH12Q9NPG4 1184 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 MARCOQ9UEW3 520 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 NEU2Q9Y3R4 380 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TPPPO94811 219 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SHBGP04278 402 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 FCGR1AP12314 374 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GYS1P13807 737 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 IL12AP29459 219 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SERPINB9P50453 376 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 NUDT2P50583 147 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CENPCQ03188 943 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 KCNH2Q12809 1159 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GCKRQ14397 625 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SUZ12Q15022 739 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SNX17Q15036 470 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TYSND1Q2T9J0 566 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZFP69Q49AA0 526 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZC2HC1CQ53FD0 456 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 NT5DC1Q5TFE4 455 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SYDE2Q5VT97 1194 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ATG14Q6ZNE5 492 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 RAB44Q7Z6P3 723 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 IFNL3Q8IZI9 196 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TAB3Q8N5C8 712 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 MIGA1Q8NAN2 632 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 LRRC20Q8TCA0 184 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 TMA16Q96EY4 203 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 WNK4Q96J92 1243 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SEMA4AQ9H3S1 761 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GTF3C4Q9UKN8 822 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 USP20Q9Y2K6 914 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 AP4B1Q9Y6B7 739 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ATP10DQ9P241 1426 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GTPBP10A4D1E9 387 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 A6NJR5 290 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 SPDYE16A6NNV3 312 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 C6orf229H3BNL8 230 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 FBP2O00757 339 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 PEX11AO75192 247 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 LRRN2O75325 713 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 GJB6O95452 261 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 VCLP18206 1134 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ZAP70P43403 619 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ATP2C1P98194 919 aaPredicted RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 PABPC4Q13310 644 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 BSPRYQ5W0U4 402 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ANKRD40Q6AI12 368 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CYP2U1Q7Z449 544 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CCDC28AQ8IWP9 274 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 FAM178BQ8IXR5 827 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CLEC4FQ8N1N0 589 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 PLEKHO2Q8TD55 490 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 ACMSDQ8TDX5 336 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 HPS3Q969F9 1004 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 NT5C1BQ96P26 610 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CITED4Q96RK1 184 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CSRNP1Q96S65 589 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 DCLK3Q9C098 648 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 CLK4Q9HAZ1 481 aaKnown RBP5.37□□□□□ -1.55
SCN11A-202ENST00000444237 FAIMQ9NVQ4 179 aa5.37□□□□□ -1.55
SCN11A-202ENST00000444237 HPS5Q9UPZ3 1129 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms