RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 ELMO3Q96BJ8 720 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 CCDC42Q96M95 316 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 SMYD3Q9H7B4 428 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 TDRD15B5MCY1 1934 aaKnown RBP14.35□□□□□ -0.11
SF1-210ENST00000443908 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 ARHGEF37A1IGU5 675 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 CARNS1A5YM72 827 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 CASTOR2A6NHX0 329 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 EIF3CLB5ME19 914 aaKnown RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 SPTLC1O15269 473 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 CYP26A1O43174 497 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 DCXO43602 365 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 CILPO75339 1184 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 DGKIO75912 1065 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 NDUFA10O95299 355 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 LCA5LO95447 670 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 RB1P06400 928 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 KRT5P13647 590 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 IBSPP21815 317 aaPredicted RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 CLCN1P35523 988 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 PDE6CP51160 858 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 PTK2Q05397 1052 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 BTG3Q14201 252 aaPredicted RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 BMS1Q14692 1282 aaKnown RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 DCLRE1AQ6PJP8 1040 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 SCARA5Q6ZMJ2 495 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 ALYREFQ86V81 257 aaKnown RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 VPS36Q86VN1 386 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 LRRC43Q8N309 656 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 RBBP8NLQ8NC74 664 aaPredicted RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 EIF3CQ99613 913 aaKnown RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 TMEM175Q9BSA9 504 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 C11orf84Q9BUA3 381 aaPredicted RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 SDCBP2Q9H190 292 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 HAUS4Q9H6D7 363 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 RC3H2Q9HBD1 1191 aaKnown RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 NOCTQ9UK39 431 aaKnown RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 PYCARDQ9ULZ3 195 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 RWDD3Q9Y3V2 267 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 PCDHB4Q9Y5E5 795 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 SNX9Q9Y5X1 595 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
SF1-210ENST00000443908 ATP8B3O60423 1300 aa14.34□□□□□ -0.11
SF1-210ENST00000443908 GRM6O15303 877 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 HUS1O60921 280 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 DDHD2O94830 711 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 PLEKP08567 350 aaPredicted RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 PAEPP09466 180 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 WEE2P0C1S8 567 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 CYP11B1P15538 503 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 EIF4A3P38919 411 aaKnown RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 USP8P40818 1118 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 KIF11P52732 1056 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 ARID5AQ03989 594 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 RNASELQ05823 741 aaKnown RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 SLC18A3Q16572 532 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 SOWAHAQ2M3V2 549 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 TMEM270Q6UE05 265 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 ZNF571Q7Z3V5 609 aaPredicted RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 UNC93AQ86WB7 457 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 ZNF280BQ86YH2 543 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 TMEM86AQ8N2M4 240 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 C3orf58Q8NDZ4 430 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 APPL2Q8NEU8 664 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 KIAA1524Q8TCG1 905 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 FAM193BQ96PV7 902 aaPredicted RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 MMS19Q96T76 1030 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 DEF6Q9H4E7 631 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 PRKAG3Q9UGI9 489 aa14.33□□□□□ -0.12
SF1-210ENST00000443908 BARX2Q9UMQ3 279 aaPredicted RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 COL4A4P53420 1690 aaPredicted RBP14.33□□□□□ -0.12
SF1-210ENST00000443908 MYO7AQ13402 2215 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 TBKBP1A7MCY6 615 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 M0QZQ0 153 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 B3GAT3O94766 335 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 IPO7O95373 1038 aaKnown RBP14.32□□□□□ -0.12
SF1-210ENST00000443908 CD58P19256 250 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
SF1-210ENST00000443908 CDR2Q01850 454 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 MTF1Q14872 753 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 CD300LGQ6UXG3 332 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 SLC47A2Q86VL8 602 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
SF1-210ENST00000443908 OLIG1Q8TAK6 271 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 WHAMMQ8TF30 809 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 DDX1Q92499 740 aaKnown RBP14.32□□□□□ -0.12
SF1-210ENST00000443908 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 SENP8Q96LD8 212 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 AGPAT1Q99943 283 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 PAAF1Q9BRP4 392 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 DNAI2Q9GZS0 605 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 NRDE2Q9H7Z3 1164 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 ALG13Q9NP73 1137 aaKnown RBP14.32□□□□□ -0.12
SF1-210ENST00000443908 NENFQ9UMX5 172 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 L1RE1Q9UN81 338 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 SCN1AP35498 2009 aa14.32□□□□□ -0.12
SF1-210ENST00000443908 GABRDO14764 452 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms