RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 GPR17Q13304 367 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 IQCB1Q15051 598 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 SLC39A12Q504Y0 691 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 FAM114A1Q8IWE2 563 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.15■□□□□ 0.34
USP39-205ENST00000442708 SPATA18Q8TC71 538 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 ARID3AQ99856 593 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 ACBD6Q9BR61 282 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 OXCT2Q9BYC2 517 aaPredicted RBP17.15■□□□□ 0.34
USP39-205ENST00000442708 NIF3L1Q9GZT8 377 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 DPEP3Q9H4B8 488 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 HMGXB4Q9UGU5 601 aa17.15■□□□□ 0.34
USP39-205ENST00000442708 C5orf42Q9H799 3197 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 PTPRDP23468 1912 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 MTMR11A4FU01 709 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 GRXCR2A6NFK2 248 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 P4HA2O15460 535 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 N4BP1O75113 896 aaKnown RBP17.14■□□□□ 0.33
USP39-205ENST00000442708 FAM163BP0C2L3 166 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 ZNF18P17022 549 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 GNL1P36915 607 aaPredicted RBP17.14■□□□□ 0.33
USP39-205ENST00000442708 ZNF165P49910 485 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 PSMC1P62191 440 aaKnown RBP17.14■□□□□ 0.33
USP39-205ENST00000442708 ADCY1Q08828 1119 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 LRMPQ12912 555 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 MAN2A1Q16706 1144 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 LEXMQ3ZCV2 418 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 INTS6LQ5JSJ4 861 aaKnown RBP17.14■□□□□ 0.33
USP39-205ENST00000442708 RARS2Q5T160 578 aaKnown RBP17.14■□□□□ 0.33
USP39-205ENST00000442708 TPGS2Q68CL5 300 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 ATAD1Q8NBU5 361 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 SMRP1Q8NCR6 262 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 CRACR2AQ9BSW2 395 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 SNX25Q9H3E2 840 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 PLEKHA4Q9H4M7 779 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 CRTAC1Q9NQ79 661 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 DZANK1Q9NVP4 752 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 TAB2Q9NYJ8 693 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 THEGQ9P2T0 379 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 MAGEC2Q9UBF1 373 aaPredicted RBP17.14■□□□□ 0.33
USP39-205ENST00000442708 AFF4Q9UHB7 1163 aaKnown RBP17.14■□□□□ 0.33
USP39-205ENST00000442708 CD207Q9UJ71 328 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 GTF3C4Q9UKN8 822 aa17.14■□□□□ 0.33
USP39-205ENST00000442708 SPTBN5Q9NRC6 3674 aaKnown RBP17.13■□□□□ 0.33
USP39-205ENST00000442708 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 ZMYND10O75800 440 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 EEF1GP26641 437 aaKnown RBP17.13■□□□□ 0.33
USP39-205ENST00000442708 KCNQ1P51787 676 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 APBA1Q02410 837 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 ORC1Q13415 861 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 KRT31Q15323 416 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 VWA3BQ502W6 1294 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 WDR44Q5JSH3 913 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 TMC5Q6UXY8 1006 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 ARHGEF19Q8IW93 802 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 EHBP1Q8NDI1 1231 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 SLC7A14Q8TBB6 771 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 HDAC7Q8WUI4 952 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 ZNF707Q96C28 371 aaPredicted RBP17.13■□□□□ 0.33
USP39-205ENST00000442708 SYT15Q9BQS2 421 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 IMPG2Q9BZV3 1241 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
USP39-205ENST00000442708 INTS2Q9H0H0 1204 aaKnown RBP17.13■□□□□ 0.33
USP39-205ENST00000442708 NDST4Q9H3R1 872 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 CBX8Q9HC52 389 aa17.13■□□□□ 0.33
USP39-205ENST00000442708 CCDC195A0A1B0GUA6 201 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 SOAT2O75908 522 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 PAPLNO95428 1278 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 C8AP07357 584 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 SRGAP2BP0DMP2 458 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 ATP1A3P13637 1013 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 P4HA1P13674 534 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 PRKCSHP14314 528 aaPredicted RBP17.12■□□□□ 0.33
USP39-205ENST00000442708 HOXB8P17481 243 aaPredicted RBP17.12■□□□□ 0.33
USP39-205ENST00000442708 SLC9A1P19634 815 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 PCSK1P29120 753 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 NDST1P52848 882 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 FAM171BQ6P995 826 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 APTXQ7Z2E3 356 aaKnown RBP17.12■□□□□ 0.33
USP39-205ENST00000442708 TCEAL8Q8IYN2 117 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 KAT5Q92993 513 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 TWNKQ96RR1 684 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 RHOBTB2Q9BYZ6 727 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 SFXN1Q9H9B4 322 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 CYP4F11Q9HBI6 524 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 SLC27A5Q9Y2P5 690 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 NOTCH4Q99466 2003 aa17.12■□□□□ 0.33
USP39-205ENST00000442708 A8MXQ7 604 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 MBTPS2O43462 519 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 PTPN1P18031 435 aaKnown RBP17.11■□□□□ 0.33
USP39-205ENST00000442708 CD58P19256 250 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 TSPY1Q01534 308 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 INCA1Q0VD86 236 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 DUSP4Q13115 394 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 PHLDB3Q6NSJ2 640 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 DPY19L2P1Q6NXN4 242 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms