RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 WDR44Q5JSH3 913 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 WWC2Q6AWC2 1192 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 IQCEQ6IPM2 695 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 PKN3Q6P5Z2 889 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 MB21D2Q8IYB1 491 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-210ENST00000441703 LNX1Q8TBB1 728 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-210ENST00000441703 ZSCAN18Q8TBC5 510 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-210ENST00000441703 HASPINQ8TF76 798 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 CRYGNQ8WXF5 182 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 BRF1Q92994 677 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 TCEAL4Q96EI5 215 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 WDR24Q96S15 920 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 ZNF577Q9BSK1 485 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 MTA3Q9BTC8 594 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 GLT8D2Q9H1C3 349 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 ABCB6Q9NP58 842 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 APOBEC2Q9Y235 224 aaKnown RBP6.99□□□□□ -1.29
HDAC6-210ENST00000441703 INVSQ9Y283 1065 aa6.99□□□□□ -1.29
HDAC6-210ENST00000441703 URB1O60287 2271 aaKnown RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 LAMA1P25391 3075 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CACNA1EQ15878 2313 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 IGKV6-21A0A0C4DH24 114 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 hCG_1642624A0A1W2PR95 340 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 E7EWF7 191 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 hCG_1984214I3L0E3 225 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 ARNTLO00327 626 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 PRRG1O14668 218 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CHUKO15111 745 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 ADAM12O43184 909 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MICAL2O94851 1124 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 FSBPO95073 299 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CYP3A4P08684 503 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 FTH1P19P0C7X4 201 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CALM1P0DP23 149 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CALM2P0DP24 149 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CALM3P0DP25 149 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 DPP6P42658 865 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CLK2P49760 499 aaKnown RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 NAPAP54920 295 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 SRSF1Q07955 248 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CYP4F3Q08477 520 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 SPIRE1Q08AE8 756 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 ELAVL2Q12926 359 aaKnown RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 GRIK3Q13003 919 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 DRP2Q13474 957 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 RAB33AQ14088 237 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MCM6Q14566 821 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 TRIP6Q15654 476 aaKnown RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MTERF2Q49AM1 385 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MAP9Q49MG5 647 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 PREPLQ4J6C6 727 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 PRSS36Q5K4E3 855 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 TYW1BQ6NUM6 668 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 POTEHQ6S545 545 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 GBP6Q6ZN66 633 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 LRRC69Q6ZNQ3 347 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 TMTC3Q6ZXV5 915 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 B4GALNT4Q76KP1 1039 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 ELOA2Q8IYF1 753 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CMTR1Q8N1G2 835 aaKnown RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 ZNF713Q8N859 430 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 PNPLA1Q8N8W4 532 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 GIMAP7Q8NHV1 300 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MAGEC3Q8TD91 643 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MIEF2Q96C03 454 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 DHX58Q96C10 678 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CABS1Q96KC9 395 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 ZFP42Q96MM3 310 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 TMEM209Q96SK2 561 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 BAG1Q99933 345 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 TRIM6Q9C030 488 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 GPR88Q9GZN0 384 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MIOSQ9NXC5 875 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 SUCLA2Q9P2R7 463 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 DKK4Q9UBT3 224 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 SEPT9Q9UHD8 586 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-210ENST00000441703 MCM8Q9UJA3 840 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 GGA2Q9UJY4 613 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 IPPQ9Y573 584 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 FAM169AQ9Y6X4 670 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 THADAQ6YHU6 1953 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
HDAC6-210ENST00000441703 ZMYM2Q9UBW7 1377 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 PYCARD-AS1I3L0S3 204 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 SH2B2O14492 632 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 NRG2O14511 850 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 PFKFB2O60825 505 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 RNF40O75150 1001 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 WISP1O95388 367 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 YEATS4O95619 227 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 SYF2O95926 243 aaKnown RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 CFIP05156 583 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 MYL4P12829 197 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 FNTAP49354 379 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 IRX1P78414 480 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 CRYMQ14894 314 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 TAF1BQ53T94 588 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-210ENST00000441703 UBXN11Q5T124 520 aa6.97□□□□□ -1.29
HDAC6-210ENST00000441703 WLSQ5T9L3 541 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms