RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 FAM136AQ96C01 138 aa6.14□□□□□ -1.43
LINC00354-202ENST00000440860 GTPBP4Q9BZE4 634 aaKnown RBP6.14□□□□□ -1.43
LINC00354-202ENST00000440860 EHD3Q9NZN3 535 aa6.14□□□□□ -1.43
LINC00354-202ENST00000440860 WNT6Q9Y6F9 365 aa6.14□□□□□ -1.43
LINC00354-202ENST00000440860 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 PPM1DO15297 605 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 URI1O94763 535 aaPredicted RBP6.13□□□□□ -1.43
LINC00354-202ENST00000440860 PDHA1P08559 390 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 ZFXP17010 805 aaPredicted RBP6.13□□□□□ -1.43
LINC00354-202ENST00000440860 HDCP19113 662 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 TOB1P50616 345 aaPredicted RBP6.13□□□□□ -1.43
LINC00354-202ENST00000440860 EXOSC9Q06265 439 aaKnown RBP6.13□□□□□ -1.43
LINC00354-202ENST00000440860 TMEM240Q5SV17 173 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 VPS53Q5VIR6 699 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 TMEM108Q6UXF1 575 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 DDX17Q92841 729 aaKnown RBP6.13□□□□□ -1.43
LINC00354-202ENST00000440860 RFKQ969G6 155 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 FKBP10Q96AY3 582 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 SARAFQ96BY9 339 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 PBKQ96KB5 322 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 ALG8Q9BVK2 526 aa6.13□□□□□ -1.43
LINC00354-202ENST00000440860 MANSC4A6NHS7 340 aaPredicted RBP6.12□□□□□ -1.43
LINC00354-202ENST00000440860 EBLN1P0CF75 366 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 CCT8P50990 548 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 SOX10P56693 466 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 EIF2B5Q13144 721 aaKnown RBP6.12□□□□□ -1.43
LINC00354-202ENST00000440860 BMPR2Q13873 1038 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 PLS1Q14651 629 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 PLAC9Q5JTB6 97 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.12□□□□□ -1.43
LINC00354-202ENST00000440860 DDB2Q92466 427 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 KAT6AQ92794 2004 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 MVB12AQ96EY5 273 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 FAM167AQ96KS9 214 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 TTYH3Q9C0H2 523 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 ARMT1Q9H993 441 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 ADAM21Q9UKJ8 722 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 PCDHA6Q9UN73 950 aa6.12□□□□□ -1.43
LINC00354-202ENST00000440860 FAM163BP0C2L3 166 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 CT47B1P0C2W7 299 aaPredicted RBP6.11□□□□□ -1.43
LINC00354-202ENST00000440860 NDUFB7P17568 137 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 AKAP5P24588 427 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 ITPKBP27987 946 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 KCNJ5P48544 419 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 PROK1P58294 105 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 TMEM119Q4V9L6 283 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 FAM160B1Q5W0V3 765 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 LAYNQ6UX15 382 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 SRRM1Q8IYB3 904 aaKnown RBP6.11□□□□□ -1.43
LINC00354-202ENST00000440860 GRAMD1CQ8IYS0 662 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 BRIX1Q8TDN6 353 aaKnown RBP6.11□□□□□ -1.43
LINC00354-202ENST00000440860 HOOK2Q96ED9 719 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 SLC35A4Q96G79 324 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 GPATCH3Q96I76 525 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 SLC46A1Q96NT5 459 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 ARHGEF3Q9NR81 526 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 PADI4Q9UM07 663 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 ANKRD6Q9Y2G4 727 aa6.11□□□□□ -1.43
LINC00354-202ENST00000440860 ANKRD62A6NC57 917 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 GCOM1H8Y6P7 765 aaPredicted RBP6.1□□□□□ -1.43
LINC00354-202ENST00000440860 HNRNPCP07910 306 aaKnown RBP eCLIP6.1□□□□□ -1.43
LINC00354-202ENST00000440860 PF4V1P10720 104 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 VCAM1P19320 739 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 ALDH9A1P49189 494 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 NEK2P51955 445 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 NKX6-1P78426 367 aaPredicted RBP6.1□□□□□ -1.43
LINC00354-202ENST00000440860 FOXF2Q12947 444 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 AMOTQ4VCS5 1084 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 KHDC1LQ5JSQ8 128 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 PPP1R32Q7Z5V6 425 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 KLHDC4Q8TBB5 520 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 NELL2Q99435 816 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 MAP3K14Q99558 947 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 SLC29A3Q9BZD2 475 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 SARS2Q9NP81 518 aaKnown RBP6.1□□□□□ -1.43
LINC00354-202ENST00000440860 SERHLQ9NQF3 203 aa6.1□□□□□ -1.43
LINC00354-202ENST00000440860 NOP58Q9Y2X3 529 aaKnown RBP6.1□□□□□ -1.43
LINC00354-202ENST00000440860 ARHGEF17Q96PE2 2063 aaPredicted RBP6.1□□□□□ -1.43
LINC00354-202ENST00000440860 AOX1Q06278 1338 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 ALDH2P05091 517 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 SOX8P57073 446 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 TCF15Q12870 199 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 FCRLBQ6BAA4 426 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 HASPINQ8TF76 798 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 HPS3Q969F9 1004 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 CDK5RAP3Q96JB5 506 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 SERTAD4Q9NUC0 356 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 CPA4Q9UI42 421 aa6.09□□□□□ -1.43
LINC00354-202ENST00000440860 PIM1P11309 404 aaPredicted RBP6.08□□□□□ -1.44
LINC00354-202ENST00000440860 ZNF134P52741 427 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 LONRF3Q496Y0 759 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 ICE2Q659A1 982 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 PTF1AQ7RTS3 328 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 ZNF551Q7Z340 670 aaPredicted RBP6.08□□□□□ -1.44
LINC00354-202ENST00000440860 FAM109AQ8N4B1 249 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 ATRIPQ8WXE1 791 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 DPF1Q92782 380 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 CGRRF1Q99675 332 aa6.08□□□□□ -1.44
LINC00354-202ENST00000440860 BRINP2Q9C0B6 783 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms