RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 UBXN2BQ14CS0 331 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 SLC44A4Q53GD3 710 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 DNAJB7Q7Z6W7 309 aaPredicted RBP21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 WDR49Q8IV35 697 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 ADGRF2Q8IZF7 708 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 XXYLT1Q8NBI6 393 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 PSMG2Q969U7 264 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 CCDC127Q96BQ5 260 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 PHOX2BQ99453 314 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 LPIN3Q9BQK8 851 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 FOXQ1Q9C009 403 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 ATXN3LQ9H3M9 355 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 DDX43Q9NXZ2 648 aaKnown RBP21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 USP25Q9UHP3 1055 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 L1RE1Q9UN81 338 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 PCDHB5Q9Y5E4 795 aa21.34■■□□□ 1.01
SHROOM1-204ENST00000440118 PRPF40AO75400 957 aaKnown RBP21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 DCNP07585 359 aaKnown RBP21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 CMA1P23946 247 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 GABRR2P28476 465 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 NFE2Q16621 373 aaPredicted RBP21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 TPRG1Q6ZUI0 275 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 TMC8Q8IU68 726 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 YAF2Q8IY57 180 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 TOP6BLQ8N6T0 577 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 PJA1Q8NG27 643 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 OR5B17Q8NGF7 314 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 GOLGA5Q8TBA6 731 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 CCDC47Q96A33 483 aaKnown RBP21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 BORCS6Q96GS4 357 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 PAGE5Q96GU1 130 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 HPDLQ96IR7 371 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 ZSWIM3Q96MP5 696 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 TRMT61BQ9BVS5 477 aaKnown RBP21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 PLA2G2FQ9BZM2 168 aa21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 SCAND2PQ9GZW5 306 aaPredicted RBP21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 CGNQ9P2M7 1197 aaKnown RBP21.33■■□□□ 1.01
SHROOM1-204ENST00000440118 PTPRJQ12913 1337 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 TGFB1I1O43294 461 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 ACTN4O43707 911 aaKnown RBP21.32■■□□□ 1
SHROOM1-204ENST00000440118 EXOC3O60645 756 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 FCARP24071 287 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 ACAT1P24752 427 aaKnown RBP21.32■■□□□ 1
SHROOM1-204ENST00000440118 PCSK1P29120 753 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 SYKP43405 635 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 EHHADHQ08426 723 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 KNOP1Q1ED39 458 aaKnown RBP21.32■■□□□ 1
SHROOM1-204ENST00000440118 GIPC2Q8TF65 315 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 DEPDC1BQ8WUY9 529 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 CHAMP1Q96JM3 812 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 GDAP2Q9NXN4 497 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 SIX4Q9UIU6 781 aa21.32■■□□□ 1
SHROOM1-204ENST00000440118 COL4A3Q01955 1670 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 KANSL1LA0AUZ9 987 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 DPYSL4O14531 572 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 MOSPD3O75425 235 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 PSMC3P17980 439 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 ATF6P18850 670 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 CDC25CP30307 473 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 GDI1P31150 447 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 VIPR2P41587 438 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 LHX1P48742 406 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 STARD6P59095 220 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 CYP24A1Q07973 514 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 ANGPT1Q15389 498 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 BMT2Q1RMZ1 405 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 INTS6LQ5JSJ4 861 aaKnown RBP21.31■■□□□ 1
SHROOM1-204ENST00000440118 GPR158Q5T848 1215 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 LRRTM3Q86VH5 581 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 DNASE1L2Q92874 299 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 IRF7Q92985 503 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 E2F7Q96AV8 911 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 MMS19Q96T76 1030 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 CGRRF1Q99675 332 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 ACBD6Q9BR61 282 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 PI4K2AQ9BTU6 479 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 ZNF334Q9HCZ1 680 aaPredicted RBP21.31■■□□□ 1
SHROOM1-204ENST00000440118 ZDHHC9Q9Y397 364 aa21.31■■□□□ 1
SHROOM1-204ENST00000440118 NRG2O14511 850 aaPredicted RBP21.3■■□□□ 1
SHROOM1-204ENST00000440118 MYL1P05976 194 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 HAPLN1P10915 354 aaPredicted RBP21.3■■□□□ 1
SHROOM1-204ENST00000440118 TRPC3Q13507 836 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 PSMD6Q15008 389 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 KMT5BQ4FZB7 885 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 POTEHQ6S545 545 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 VITQ6UXI7 678 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 SPATA2LQ8IUW3 424 aaPredicted RBP21.3■■□□□ 1
SHROOM1-204ENST00000440118 SPATA18Q8TC71 538 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 LRRC3Q9BY71 257 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 BCO2Q9BYV7 579 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 HEBP1Q9NRV9 189 aa21.3■■□□□ 1
SHROOM1-204ENST00000440118 MRPS17Q9Y2R5 130 aaKnown RBP21.3■■□□□ 1
SHROOM1-204ENST00000440118 DENND4CQ5VZ89 1909 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 OBSL1O75147 1896 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 HEPACAM2A8MVW5 462 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 ZNF263O14978 683 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 PHACTR2O75167 634 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 TNNC1P63316 161 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 PSMD2Q13200 908 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 STXBP5Q5T5C0 1151 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms