RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 UBALD2Q8IYN6 164 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 HS6ST3Q8IZP7 471 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 C2orf15Q8WU43 125 aaKnown RBP25.36■■□□□ 1.65
VARS-217ENST00000440048 KBTBD7Q8WVZ9 684 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 RSAD2Q8WXG1 361 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 ING5Q8WYH8 240 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 TMLHEQ9NVH6 421 aa25.36■■□□□ 1.65
VARS-217ENST00000440048 TMEM221A6NGB7 291 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 M0R296 226 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 SOAT2O75908 522 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 EPHB3P54753 998 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 TDGQ13569 410 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 INTS6LQ5JSJ4 861 aaKnown RBP25.35■■□□□ 1.65
VARS-217ENST00000440048 PRSS36Q5K4E3 855 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 C1orf220Q5T0J3 134 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 NPAS3Q8IXF0 933 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 SPPL2BQ8TCT7 592 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 MMS19Q96T76 1030 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 GTPBP4Q9BZE4 634 aaKnown RBP25.35■■□□□ 1.65
VARS-217ENST00000440048 XYLT2Q9H1B5 865 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 DNAJC25Q9H1X3 360 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 MAN1B1Q9UKM7 699 aa25.35■■□□□ 1.65
VARS-217ENST00000440048 ANHXE9PGG2 379 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 HCRTO43612 131 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 STAU1O95793 577 aaKnown RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 CEBPBP17676 345 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 ATICP31939 592 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 PSMC2P35998 433 aaKnown RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 TUFMP49411 452 aaKnown RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 VAMP7P51809 220 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 HTR4Q13639 388 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 WDR72Q3MJ13 1102 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 ISM2Q6H9L7 571 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 PDZD4Q76G19 769 aaPredicted RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 FAM186BQ8IYM0 893 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 ST13P5Q8NFI4 369 aaPredicted RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 NXPE3Q969Y0 559 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 SYAP1Q96A49 352 aaPredicted RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 TCEAL4Q96EI5 215 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 PKMYT1Q99640 499 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 SEPT5Q99719 369 aaPredicted RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 KCNH6Q9H252 994 aa25.34■■□□□ 1.65
VARS-217ENST00000440048 ABI2Q9NYB9 513 aaPredicted RBP25.34■■□□□ 1.65
VARS-217ENST00000440048 ZNF197O14709 1029 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 IKBKBO14920 756 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 VNN1O95497 513 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 HAPLN1P10915 354 aaPredicted RBP25.33■■□□□ 1.65
VARS-217ENST00000440048 WARSP23381 471 aaKnown RBP25.33■■□□□ 1.65
VARS-217ENST00000440048 PCSK1P29120 753 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 CCR2P41597 374 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 EPHA5P54756 1037 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 NCOA4Q13772 614 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 NFE2Q16621 373 aaPredicted RBP25.33■■□□□ 1.65
VARS-217ENST00000440048 MGAT5BQ3V5L5 792 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 ZACNQ401N2 412 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 CYP4A22Q5TCH4 519 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 HFE2Q6ZVN8 426 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 INTS8Q75QN2 995 aaKnown RBP25.33■■□□□ 1.65
VARS-217ENST00000440048 ADSSL1Q8N142 457 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 ASIC4Q96FT7 647 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 ASAH2Q9NR71 780 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 PCDHB5Q9Y5E4 795 aa25.33■■□□□ 1.65
VARS-217ENST00000440048 NRG2O14511 850 aaPredicted RBP25.32■■□□□ 1.64
VARS-217ENST00000440048 MYL4P12829 197 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 LMO2P25791 158 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 TNNC1P63316 161 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 POTEHQ6S545 545 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 SV2AQ7L0J3 742 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 SLC44A3Q8N4M1 653 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 LEMD2Q8NC56 503 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 MCRS1Q96EZ8 462 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 EEF2KMTQ96G04 330 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 MRPL45Q9BRJ2 306 aaKnown RBP25.32■■□□□ 1.64
VARS-217ENST00000440048 LRRC3Q9BY71 257 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 VRTNQ9H8Y1 702 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 NXF1Q9UBU9 619 aaKnown RBP25.32■■□□□ 1.64
VARS-217ENST00000440048 GTF3C4Q9UKN8 822 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 ASB3Q9Y575 518 aa25.32■■□□□ 1.64
VARS-217ENST00000440048 CETN3O15182 167 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 MOSPD3O75425 235 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 MICAL2O94851 1124 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 TRIM49P0CI25 452 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 TRIM49CP0CI26 452 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 KRT13P13646 458 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 ATF6P18850 670 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 PMS1P54277 932 aaKnown RBP25.31■■□□□ 1.64
VARS-217ENST00000440048 CCDC142Q17RM4 750 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 ANKRD40Q6AI12 368 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 PARM1Q6UWI2 310 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 DNAJB7Q7Z6W7 309 aaPredicted RBP25.31■■□□□ 1.64
VARS-217ENST00000440048 TMC8Q8IU68 726 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 FGF14Q92915 247 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 PBXIP1Q96AQ6 731 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 FAM122AQ96E09 287 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 TSG101Q99816 390 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 PI4K2AQ9BTU6 479 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 GDE1Q9NZC3 331 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 DUSP12Q9UNI6 340 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 NUMBLQ9Y6R0 609 aa25.31■■□□□ 1.64
VARS-217ENST00000440048 MYBPHLA2RUH7 354 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms