RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PTPRJQ12913 1337 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 SOWAHAQ2M3V2 549 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 SGSM1Q2NKQ1 1148 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 EDRF1Q3B7T1 1238 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 WDR72Q3MJ13 1102 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 COBLL1Q53SF7 1204 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 ZNF667Q5HYK9 610 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
MCF2L-216ENST00000439475 C4orf50Q6ZRC1 276 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 DNAJB7Q7Z6W7 309 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-216ENST00000439475 SPATA2LQ8IUW3 424 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-216ENST00000439475 FAM186BQ8IYM0 893 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 SLC44A3Q8N4M1 653 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 ITFG1Q8TB96 612 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 MCRS1Q96EZ8 462 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 C11orf16Q9NQ32 467 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 ABI2Q9NYB9 513 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-216ENST00000439475 FBXL21Q9UKT6 434 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 CDH9Q9ULB4 789 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 DUSP12Q9UNI6 340 aa11.22□□□□□ -0.61
MCF2L-216ENST00000439475 LRRIQ3A6PVS8 624 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 ANHXE9PGG2 379 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 STX10O60499 249 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 N4BP1O75113 896 aaKnown RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 TACC1O75410 805 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 HAPLN1P10915 354 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 EPB41P11171 864 aaKnown RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 WARSP23381 471 aaKnown RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 PRCPP42785 496 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 CASP4P49662 377 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 CLDN10P78369 228 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 FKBP3Q00688 224 aaKnown RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 NCOA4Q13772 614 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 ARHGAP15Q53QZ3 475 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 LRRTM3Q86VH5 581 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 OR6B3Q8NGW1 331 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 SPATA20Q8TB22 786 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 ZNF516Q92618 1163 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 TAF4BQ92750 862 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 PSMG2Q969U7 264 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 GCNAQ96QF7 691 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 RTP3Q9BQQ7 232 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 IMPG2Q9BZV3 1241 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 DNAI2Q9GZS0 605 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 MFSD1Q9H3U5 465 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 VRTNQ9H8Y1 702 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 ZFP14Q9HCL3 533 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 ABCB6Q9NP58 842 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 CEP72Q9P209 647 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 MAGEC2Q9UBF1 373 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.61
MCF2L-216ENST00000439475 WNT16Q9UBV4 365 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 ZMYM5Q9UJ78 669 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 GTF3C4Q9UKN8 822 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 NUMBLQ9Y6R0 609 aa11.21□□□□□ -0.61
MCF2L-216ENST00000439475 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.62
MCF2L-216ENST00000439475 A8MXQ7 604 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 PSMA7O14818 248 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 PDGFRBP09619 1106 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 CSH1P0DML2 217 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 CSH2P0DML3 217 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 SRFP11831 508 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 RFX1P22670 979 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
MCF2L-216ENST00000439475 CDC25CP30307 473 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 EPHA5P54756 1037 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 MYL6P60660 151 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 PFKPQ01813 784 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 LRRC63Q05C16 580 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 ZNF699Q32M78 642 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 ZACNQ401N2 412 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 PRSS36Q5K4E3 855 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 SV2AQ7L0J3 742 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 HS6ST3Q8IZP7 471 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 FBXL6Q8N531 539 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 RSAD2Q8WXG1 361 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 ING5Q8WYH8 240 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 E2F7Q96AV8 911 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 DHTKD1Q96HY7 919 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-216ENST00000439475 FAM84AQ96KN4 292 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 PRRX2Q99811 253 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 SYT15Q9BQS2 421 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 PI4K2AQ9BTU6 479 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 KCNH6Q9H252 994 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 CRISPLD1Q9H336 500 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 SLITRK6Q9H5Y7 841 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 REV3LO60673 3130 aa11.2□□□□□ -0.62
MCF2L-216ENST00000439475 STK25O00506 426 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 GADD45BO75293 160 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-216ENST00000439475 ECI2O75521 394 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 AKAP3O75969 853 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 VNN2O95498 520 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 CCNE1P24864 410 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 GABRR2P28476 465 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 GTF2H1P32780 548 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms