RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 FOSP01100 380 aaPredicted RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 CYP1A1P04798 512 aaPredicted RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 TFDP1Q14186 410 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 CCNG2Q16589 344 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 SYDE1Q6ZW31 735 aaPredicted RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 VPS52Q8N1B4 723 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 ZNF276Q8N554 614 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 TMEM39BQ9GZU3 492 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 SAE1Q9UBE0 346 aaPredicted RBP14.29□□□□□ -0.12
PCNX3-202ENST00000439247 LNPEPQ9UIQ6 1025 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
PCNX3-202ENST00000439247 TJP3O95049 919 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 GPX6P59796 221 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 SLC34A1Q06495 639 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 LAMB3Q13751 1172 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 RGS9BPQ6ZS82 235 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.28□□□□□ -0.12
PCNX3-202ENST00000439247 KAT6AQ92794 2004 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 CNTNAP1P78357 1384 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 CCDC22O60826 627 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 ETS2P15036 469 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 PEX3P56589 373 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 ZBTB16Q05516 673 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 SNRNP35Q16560 246 aaKnown RBP14.28□□□□□ -0.12
PCNX3-202ENST00000439247 WDR72Q3MJ13 1102 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 MSS51Q4VC12 460 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 CMPK2Q5EBM0 449 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 SYCP2LQ5T4T6 812 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 ANKFY1Q9P2R3 1169 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 USP1O94782 785 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 UNGP13051 313 aaPredicted RBP14.28□□□□□ -0.12
PCNX3-202ENST00000439247 MAN1A1P33908 653 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 SOX10P56693 466 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 HAUS6Q7Z4H7 955 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 ALYREFQ86V81 257 aaKnown RBP14.28□□□□□ -0.12
PCNX3-202ENST00000439247 ZBED3Q96IU2 234 aaPredicted RBP14.28□□□□□ -0.12
PCNX3-202ENST00000439247 TMEM121Q9BTD3 319 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 KCNK13Q9HB14 408 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 SMG5Q9UPR3 1016 aaKnown RBP14.28□□□□□ -0.12
PCNX3-202ENST00000439247 UBE4BO95155 1302 aa14.28□□□□□ -0.12
PCNX3-202ENST00000439247 DNALI1O14645 258 aaPredicted RBP14.27□□□□□ -0.12
PCNX3-202ENST00000439247 SKIP12755 728 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 DSG3P32926 999 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 CENPCQ03188 943 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 SEPT7Q16181 437 aaKnown RBP14.27□□□□□ -0.12
PCNX3-202ENST00000439247 TXNRD3NBQ6F5E7 133 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 SLC25A41Q8N5S1 370 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.12
PCNX3-202ENST00000439247 GATA6Q92908 595 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 CYTH2Q99418 400 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 GORASP1Q9BQQ3 440 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 TMEM120AQ9BXJ8 343 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 PRR12Q9ULL5 1215 aa14.27□□□□□ -0.12
PCNX3-202ENST00000439247 E5RJQ4 531 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 ABLIM1O14639 778 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 ABHD2P08910 425 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 SPOPLQ6IQ16 392 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 NSL1Q96IY1 281 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 NT5C1BQ96P26 610 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 ACCSQ96QU6 501 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 CSRNP1Q96S65 589 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 UBE2OQ9C0C9 1292 aaKnown RBP14.27□□□□□ -0.13
PCNX3-202ENST00000439247 RNF181Q9P0P0 153 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 MYPNQ86TC9 1320 aa14.27□□□□□ -0.13
PCNX3-202ENST00000439247 TRAF1Q13077 416 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 MTMR2Q13614 643 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 ANKRD22Q5VYY1 191 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 NLRX1Q86UT6 975 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 RELL1Q8IUW5 271 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 RIBC1Q8N443 379 aaPredicted RBP14.26□□□□□ -0.13
PCNX3-202ENST00000439247 FAM161BQ96MY7 647 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 TUBGCP5Q96RT8 1024 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 CLUHO75153 1309 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 SBF1O95248 1867 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 FAM237BA0A1B0GVD1 139 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 LIASO43766 372 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 DDNO94850 711 aaPredicted RBP14.26□□□□□ -0.13
PCNX3-202ENST00000439247 TROVE2P10155 538 aaKnown RBP eCLIP14.26□□□□□ -0.132e-42■■■■■ 52.4
PCNX3-202ENST00000439247 ECE1P42892 770 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 ARFIP2P53365 341 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 NRLP54845 237 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 RPL7AP62424 266 aaKnown RBP14.26□□□□□ -0.13
PCNX3-202ENST00000439247 OCRLQ01968 901 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 KRT39Q6A163 491 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 MFSD7Q6UXD7 560 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 STMN2Q93045 179 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 MANSC1Q9H8J5 431 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 ZNF395Q9H8N7 513 aaPredicted RBP14.26□□□□□ -0.13
PCNX3-202ENST00000439247 SAR1AQ9NR31 198 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
PCNX3-202ENST00000439247 LARSQ9P2J5 1176 aaKnown RBP14.26□□□□□ -0.13
PCNX3-202ENST00000439247 PSMC3IPQ9P2W1 217 aaPredicted RBP14.26□□□□□ -0.13
PCNX3-202ENST00000439247 STK24Q9Y6E0 443 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms