RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 A0A0A6YYK5 440 aaPredicted RBP13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 TRIM43BA6NCK2 446 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 CASTOR2A6NHX0 329 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 TMCO5BA8MYB1 307 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 CYB561D2O14569 222 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 FGFR1P11362 822 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 DSC1Q08554 894 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 SYT10Q6XYQ8 523 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 NPAS4Q8IUM7 802 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 ABI1Q8IZP0 508 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 CTNNBL1Q8WYA6 563 aaPredicted RBP13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 SECISBP2LQ93073 1101 aaKnown RBP13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 TRIM43Q96BQ3 446 aaPredicted RBP13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 IRX2Q9BZI1 471 aaPredicted RBP13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 L1RE1Q9UN81 338 aa13.16□□□□□ -0.3
HLA-DOB-206ENST00000438763 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 CD19P15391 556 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 RAG1P15918 1043 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 WARSP23381 471 aaKnown RBP13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 GNL1P36915 607 aaPredicted RBP13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 STILQ15468 1287 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 CNGA2Q16280 664 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 MFSD5Q6N075 450 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 DSTYKQ6XUX3 929 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 CRYBG2Q8N1P7 616 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 TMEM86AQ8N2M4 240 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 KIF18AQ8NI77 898 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 TFAP2BQ92481 460 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 SENP8Q96LD8 212 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 CASD1Q96PB1 797 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 ZSWIM1Q9BR11 485 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 PAAF1Q9BRP4 392 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 ZNF518BQ9C0D4 1074 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 LHX5Q9H2C1 402 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 SNX25Q9H3E2 840 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 PRDM5Q9NQX1 630 aaPredicted RBP13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 TBC1D13Q9NVG8 400 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 DNAI1Q9UI46 699 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 PAXBP1Q9Y5B6 917 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 SCN1AP35498 2009 aa13.15□□□□□ -0.3
HLA-DOB-206ENST00000438763 LTBP2Q14767 1821 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 NCOR1O75376 2440 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 A8MXQ7 604 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 GABRDO14764 452 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 B3GAT3O94766 335 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 DDHD2O94830 711 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 LSM8O95777 96 aaKnown RBP13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 PFKMP08237 780 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 CFHP08603 1231 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 IGFBP6P24592 240 aaPredicted RBP13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 ITGB8P26012 769 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 CDH5P33151 784 aaPredicted RBP13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 NOMO3P69849 1222 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 GPC5P78333 572 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 CENPCQ03188 943 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 RNASELQ05823 741 aaKnown RBP13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 TCEAL1Q15170 157 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 SGO2Q562F6 1265 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 CD300LGQ6UXG3 332 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 DNAAF5Q86Y56 855 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 ZNF280BQ86YH2 543 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 COLGALT2Q8IYK4 626 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 ADGRF2Q8IZF7 708 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 SLC35F6Q8N357 371 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 C3orf58Q8NDZ4 430 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 TRIM58Q8NG06 486 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 SPATA18Q8TC71 538 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 VCPIP1Q96JH7 1222 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 CALR3Q96L12 384 aaKnown RBP13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 NOX5Q96PH1 765 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 FAM193BQ96PV7 902 aaPredicted RBP13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 CACNG4Q9UBN1 327 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 SALL4Q9UJQ4 1053 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 CEP83Q9Y592 693 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
HLA-DOB-206ENST00000438763 SCN5AQ14524 2016 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 TMEM189-UBE2V1I3L0A0 370 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 EFCAB14O75071 495 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 MOCS3O95396 460 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 ABCB4P21439 1286 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 CASQ1P31415 396 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 NSFP46459 744 aaKnown RBP13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 LHX1P48742 406 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 ORC1Q13415 861 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms