RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CYP4F22Q6NT55 531 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 MON1BQ7L1V2 547 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CEP120Q8N960 986 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 GIMAP7Q8NHV1 300 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 N4BP2L2Q92802 583 aaPredicted RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 HERPUD2Q9BSE4 406 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CDT1Q9H211 546 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 PABPC3Q9H361 631 aaKnown RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 SEMA4AQ9H3S1 761 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 MCM8Q9UJA3 840 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 TPX2Q9ULW0 747 aaKnown RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 ANK1P16157 1881 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 TMEM88BA6NKF7 163 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 THAP12O43422 761 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CAND2O75155 1236 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CYP1A1P04798 512 aaPredicted RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 DRG2P55039 364 aaKnown RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 BPIFB4P59827 614 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 NCOA4Q13772 614 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 AMHR2Q16671 573 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 PREPLQ4J6C6 727 aaPredicted RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 DENND2CQ68D51 928 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CCDC25Q86WR0 208 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 IFNLR1Q8IU57 520 aaPredicted RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 KIAA0319LQ8IZA0 1049 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 FAM81BQ96LP2 452 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 FAM118BQ9BPY3 351 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 ARHGAP39Q9C0H5 1083 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 CHST7Q9NS84 486 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 TNFSF13BQ9Y275 285 aa14.71□□□□□ -0.05
PTCHD3-201ENST00000438700 TLDC2A0PJX2 215 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 ECEL1O95672 775 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 CLTAP09496 248 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 SMIM10L2AP0DMW4 78 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 SMIM10L2BP0DMW5 78 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 CHRM1P11229 460 aaPredicted RBP14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 SLC29A2Q14542 456 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 FAM187BQ17R55 369 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 ZNF677Q86XU0 584 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 WDR49Q8IV35 697 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 CCDC50Q8IVM0 306 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 PARP9Q8IXQ6 854 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 PLVAPQ9BX97 442 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 HEMGNQ9BXL5 484 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 DONSONQ9NYP3 566 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 ADAM22Q9P0K1 906 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 CEP83Q9Y592 693 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 CST3P01034 146 aaPredicted RBP14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 IGHA2P01877 340 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 SSR1P43307 286 aaKnown RBP14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 CDR1P51861 262 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 NOMO3P69849 1222 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 BEX3Q00994 111 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 TRIP13Q15645 432 aaPredicted RBP14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 ZNF394Q53GI3 561 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 ARFGAP2Q8N6H7 521 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 CPB2Q96IY4 423 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 MTMR12Q9C0I1 747 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 FAM49AQ9H0Q0 323 aaPredicted RBP14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 AVENQ9NQS1 362 aaPredicted RBP14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 MTRF1LQ9UGC7 380 aaKnown RBP14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 USTQ9Y2C2 406 aa14.7□□□□□ -0.06
PTCHD3-201ENST00000438700 RRN3P2A6NIE6 340 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 MYBL1P10243 752 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 CD58P19256 250 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 ELF1P32519 619 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 SCTRP47872 440 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 PPP2R2AP63151 447 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 KRT17Q04695 432 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 MFSD10Q14728 455 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 TMEM192Q8IY95 271 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 AP5M1Q9H0R1 490 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 CENPFP49454 3210 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 GPR25O00155 361 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 FSCN2O14926 492 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 MYL3P08590 195 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 CPT1AP50416 773 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 EIF3BP55884 814 aaKnown RBP14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 TMEM62Q0P6H9 643 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 KIZQ2M2Z5 673 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 AGBL2Q5U5Z8 902 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 TRIM11Q96F44 468 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 HHIPL1Q96JK4 782 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 IMPG2Q9BZV3 1241 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 PDZD7Q9H5P4 517 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 LRRC19Q9H756 370 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 ASIC3Q9UHC3 531 aa14.69□□□□□ -0.06
PTCHD3-201ENST00000438700 CXCL8P10145 99 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 ARF4P18085 180 aaPredicted RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 PSMC4P43686 418 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 SLCO1A2P46721 670 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 VPS41P49754 854 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 FCGRTP55899 365 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 TAS2R40P59535 323 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 MAMLD1Q13495 774 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 SNCBQ16143 134 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 C12orf50Q8NA57 414 aaPredicted RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 DDX27Q96GQ7 796 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms