RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PCDHB5Q9Y5E4 795 aa26.53■■□□□ 1.84
RAPGEF1-206ENST00000438647 LRRIQ3A6PVS8 624 aaPredicted RBP26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 GABRDO14764 452 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 STAU1O95793 577 aaKnown RBP26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 CST3P01034 146 aaPredicted RBP26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 EPHA5P54756 1037 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 TNNC1P63316 161 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 VEPH1Q14D04 833 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 INTS6LQ5JSJ4 861 aaKnown RBP26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 PRSS36Q5K4E3 855 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 LIMS2Q7Z4I7 341 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 LRRTM3Q86VH5 581 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 SPATA20Q8TB22 786 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 PLEKHO2Q8TD55 490 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 RSAD2Q8WXG1 361 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 ING5Q8WYH8 240 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 MMS19Q96T76 1030 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 NOTCH4Q99466 2003 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 ABI2Q9NYB9 513 aaPredicted RBP26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 PCDHA5Q9Y5H7 936 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 NUMBLQ9Y6R0 609 aa26.52■■□□□ 1.84
RAPGEF1-206ENST00000438647 EDRF1Q3B7T1 1238 aa26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 COBLL1Q53SF7 1204 aa26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 INTS8Q75QN2 995 aaKnown RBP26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 SUGP1Q8IWZ8 645 aaKnown RBP26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 SMYD4Q8IYR2 804 aaPredicted RBP26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 SLC44A3Q8N4M1 653 aa26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 TTC9BQ8N6N2 239 aa26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 PSMG2Q969U7 264 aa26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 DNAJC25Q9H1X3 360 aa26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 SMOC2Q9H3U7 446 aa26.51■■□□□ 1.83
RAPGEF1-206ENST00000438647 IKBKBO14920 756 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 FAM163BP0C2L3 166 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 MYL4P12829 197 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 CEBPBP17676 345 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 ENPEPQ07075 957 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 ADAM9Q13443 819 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 WDR72Q3MJ13 1102 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 ZCWPW2Q504Y3 356 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 TDRD10Q5VZ19 366 aaKnown RBP26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 OSTM1Q86WC4 334 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 HS6ST3Q8IZP7 471 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 FAM200AQ8TCP9 573 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 ABCB6Q9NP58 842 aa26.5■■□□□ 1.83
RAPGEF1-206ENST00000438647 FGF19O95750 216 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 C4BPAP04003 597 aaKnown RBP26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 SRFP11831 508 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 KRT13P13646 458 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 WARSP23381 471 aaKnown RBP26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 ACAT1P24752 427 aaKnown RBP26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 PSMC2P35998 433 aaKnown RBP26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 MYL6P60660 151 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 NCOA4Q13772 614 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 PARM1Q6UWI2 310 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 FBXL6Q8N531 539 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 KBTBD7Q8WVZ9 684 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 FGF14Q92915 247 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 TCEAL4Q96EI5 215 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 MCRS1Q96EZ8 462 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 VRTNQ9H8Y1 702 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 FBXL21Q9UKT6 434 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 CDH9Q9ULB4 789 aa26.49■■□□□ 1.83
RAPGEF1-206ENST00000438647 GADD45BO75293 160 aaPredicted RBP26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 TACC1O75410 805 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 SOAT2O75908 522 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 AKAP3O75969 853 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 CLSTN1O94985 981 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 HAPLN1P10915 354 aaPredicted RBP26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 CCR2P41597 374 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 PRCPP42785 496 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 VAMP7P51809 220 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 MAPRE1Q15691 268 aaKnown RBP26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 ZNF699Q32M78 642 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 DNAJB7Q7Z6W7 309 aaPredicted RBP26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 FAM186BQ8IYM0 893 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 TSG101Q99816 390 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 GPR88Q9GZN0 384 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 XYLT2Q9H1B5 865 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 SNX25Q9H3E2 840 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 TMLHEQ9NVH6 421 aa26.48■■□□□ 1.83
RAPGEF1-206ENST00000438647 UBE2HP62256 183 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 DLG4P78352 724 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 STIM1Q13586 685 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 TAF12Q16514 161 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 ZACNQ401N2 412 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 C4orf50Q6ZRC1 276 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 TMC8Q8IU68 726 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 ERCC4Q92889 916 aaPredicted RBP26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 FUBP3Q96I24 572 aaKnown RBP eCLIP26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 PKMYT1Q99640 499 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 SYT15Q9BQS2 421 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 MKNK1Q9BUB5 465 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 NXF1Q9UBU9 619 aaKnown RBP26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 GTF3C4Q9UKN8 822 aa26.47■■□□□ 1.83
RAPGEF1-206ENST00000438647 CETN3O15182 167 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 NARSO43776 548 aaKnown RBP26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 ATF6P18850 670 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 PPP1R2P41236 205 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 CFAP221Q4G0U5 840 aa26.46■■□□□ 1.83
RAPGEF1-206ENST00000438647 ZNF667Q5HYK9 610 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms