RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 A1L4Q6 167 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 MEI4A8MW99 385 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 WDR64B1ANS9 1081 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 ENC1O14682 589 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 ADAM23O75077 832 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 THP07101 528 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
RTN4-211ENST00000438462 CDK4P11802 303 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 GABRG2P18507 467 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 GLDCP23378 1020 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 BFSP1Q12934 665 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 PLD1Q13393 1074 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 SKIDA1Q1XH10 827 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 EOGTQ5NDL2 527 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 XKR5Q6UX68 686 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 CD300LGQ6UXG3 332 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 RNF19BQ6ZMZ0 732 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
RTN4-211ENST00000438462 CDR2LQ86X02 465 aaPredicted RBP12.28□□□□□ -0.44
RTN4-211ENST00000438462 SFTPA1Q8IWL2 248 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 C3orf58Q8NDZ4 430 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 EXTL1Q92935 676 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 MIR1-1HGQ9H1L0 117 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 TBC1D22BQ9NU19 505 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
RTN4-211ENST00000438462 NBASA2RRP1 2371 aa12.27□□□□□ -0.44
RTN4-211ENST00000438462 IGLV3-22A0A075B6J6 115 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 A0A0D9SFI3 127 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 NDUFS2O75306 463 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 PPFIA2O75334 1257 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 CPB1P15086 417 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 COL8A1P27658 744 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 ACADVLP49748 655 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 CLCNKBP51801 687 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 EPHB3P54753 998 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 CMTM8Q8IZV2 173 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 SPATA20Q8TB22 786 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 USP13Q92995 863 aaPredicted RBP12.27□□□□□ -0.45
RTN4-211ENST00000438462 SLC46A2Q9BY10 475 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 ANO3Q9BYT9 981 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 CD93Q9NPY3 652 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 HELLSQ9NRZ9 838 aa12.27□□□□□ -0.45
RTN4-211ENST00000438462 OBSL1O75147 1896 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 H7C4K7 107 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 TRAPPC3O43617 180 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 FGF19O95750 216 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 MPOP05164 745 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 SMARCA1P28370 1054 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 OPRD1P41143 372 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 INAVAQ3KP66 663 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 HSF5Q4G112 596 aaPredicted RBP12.26□□□□□ -0.45
RTN4-211ENST00000438462 CTXN3Q4LDR2 81 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 RNF149Q8NC42 400 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 ATP2A3Q93084 1043 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 ACAP3Q96P50 834 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 SEMA3CQ99985 751 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 SPZ1Q9BXG8 430 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 KIF9Q9HAQ2 790 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 MAFFQ9ULX9 164 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 CLCA2Q9UQC9 943 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 PCDHB1Q9Y5F3 818 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 WNT6Q9Y6F9 365 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 DENND4CQ5VZ89 1909 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 ABCA2Q9BZC7 2435 aa12.26□□□□□ -0.45
RTN4-211ENST00000438462 A0A1B0GVT2 93 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 BCAT2O15382 392 aaPredicted RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 MARCH6O60337 910 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 AGFG2O95081 481 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 VNN2O95498 520 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 C1SP09871 688 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 SFTPCP11686 197 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 ARF4P18085 180 aaPredicted RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 AVPR1AP37288 418 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 CCT8P50990 548 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 IL9RQ01113 521 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 LAMTOR4Q0VGL1 99 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 MTF1Q14872 753 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 NCAPHQ15003 741 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 KDM7AQ6ZMT4 941 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 DNAJB7Q7Z6W7 309 aaPredicted RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 PTRH1Q86Y79 214 aaKnown RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 PRPF31Q8WWY3 499 aaKnown RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 DNASE2BQ8WZ79 361 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 VCPIP1Q96JH7 1222 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 CNDP2Q96KP4 475 aaKnown RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 PGLYRP2Q96PD5 576 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 CRISPLD1Q9H336 500 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 SENP2Q9HC62 589 aa12.25□□□□□ -0.45
RTN4-211ENST00000438462 DUS2Q9NX74 493 aaKnown RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 TP53BP1Q12888 1972 aaPredicted RBP12.25□□□□□ -0.45
RTN4-211ENST00000438462 AKAP9Q99996 3911 aa12.24□□□□□ -0.45
RTN4-211ENST00000438462 TBX3O15119 743 aa12.24□□□□□ -0.45
RTN4-211ENST00000438462 CHMP2AO43633 222 aa12.24□□□□□ -0.45
RTN4-211ENST00000438462 PCDHGA12O60330 932 aa12.24□□□□□ -0.45
RTN4-211ENST00000438462 DIAPH2O60879 1101 aa12.24□□□□□ -0.45
RTN4-211ENST00000438462 ZNF217O75362 1048 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms