RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ACTR2P61160 394 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SLC15A2Q16348 729 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 MDH1BQ5I0G3 518 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 RABGAP1LQ5R372 815 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM154Q6P9G4 183 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 LRRC6Q86X45 466 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SULF1Q8IWU6 871 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 SIX6OS1Q8N1H7 587 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 FBXO36Q8NEA4 188 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ATG4CQ96DT6 458 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 MTBPQ96DY7 904 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 NAF1Q96HR8 494 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 VCPIP1Q96JH7 1222 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 THTPAQ9BU02 230 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 IKZF4Q9H2S9 585 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 MAP3K20Q9NYL2 800 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CTNNAL1Q9UBT7 734 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM150BA6NC51 233 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 TRPA1O75762 1119 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CYP1A2P05177 515 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PECAM1P16284 738 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 VCAM1P19320 739 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 TM4SF1P30408 202 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 RFC5P40937 340 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 KPNA2P52292 529 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 VCPP55072 806 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 OTUD4Q01804 1114 aaKnown RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 MXD4Q14582 209 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ANKRD20A4Q4UJ75 823 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ANKRD20A2Q5SQ80 823 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ANKRD20A1Q5TYW2 823 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CRELD2Q6UXH1 353 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ARID3BQ8IVW6 561 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ACTL9Q8TC94 416 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CERKQ8TCT0 537 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 KAT2BQ92831 832 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 E2F7Q96AV8 911 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ELMO3Q96BJ8 720 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PAFAH2Q99487 392 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PDCD2LQ9BRP1 358 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 EFHD1Q9BUP0 239 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 FRMD8Q9BZ67 464 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-205ENST00000438362 PCDH9Q9HC56 1237 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 VAV3Q9UKW4 847 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 ZNRF3Q9ULT6 936 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 CLEC11AQ9Y240 323 aa7.01□□□□□ -1.29
CSDE1-205ENST00000438362 DCDC2CA8MYV0 355 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 F5H423 210 aaPredicted RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 H3BRJ5 948 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 OPLAHO14841 1288 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 PTPN4P29074 926 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 CPA2P48052 419 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 CLK2P49760 499 aaKnown RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 SERPINB9P50453 376 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 FMO1Q01740 532 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 RCN1Q15293 331 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 LARP7Q4G0J3 582 aaKnown RBP eCLIP7□□□□□ -1.29
CSDE1-205ENST00000438362 SEZ6Q53EL9 994 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 TAF1BQ53T94 588 aaPredicted RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 STYK1Q6J9G0 422 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SLC30A9Q6PML9 568 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ARMCX2Q7L311 632 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 NIPA1Q7RTP0 329 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SLFN11Q7Z7L1 901 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 MTDHQ86UE4 582 aaKnown RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 RASSF3Q86WH2 238 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 NDUFAF2Q8N183 169 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ARHGAP18Q8N392 663 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 PIP4K2CQ8TBX8 421 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SPIRE2Q8WWL2 714 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 FGD4Q96M96 766 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 FRMD8P1Q9BZ68 369 aaPredicted RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 PCMTD2Q9NV79 361 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 BFARQ9NZS9 450 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 DLGAP2Q9P1A6 1054 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ZFATQ9P243 1243 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 PIK3R2O00459 728 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 FSCN2O14926 492 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 KCNA3P22001 575 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 JAM2P57087 298 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SESN2P58004 480 aaPredicted RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 XRCC4Q13426 336 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 MTFR1Q15390 333 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 KCNT1Q5JUK3 1230 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 TTC39BQ5VTQ0 682 aaPredicted RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 MAP4K3Q8IVH8 894 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SAMD3Q8N6K7 520 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SEPT1Q8WYJ6 367 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ANKRD27Q96NW4 1050 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 CGRRF1Q99675 332 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SH3GL3Q99963 347 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ZNF518BQ9C0D4 1074 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 DONSONQ9NYP3 566 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 FAM198AQ9UFP1 575 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SCN11AQ9UI33 1791 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ANKRD63C9JTQ0 380 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 M0QZ92 97 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 OATP04181 439 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 NAMPTP43490 491 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 SERPINB4P48594 390 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms