RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
CUX1-206ENST00000437600 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 FAM187AA6NFU0 413 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 TTC36A6NLP5 189 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 PODXLO00592 558 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 FSCN2O14926 492 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 CA12O43570 354 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 CLTAP09496 248 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 MTMR3Q13615 1198 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 ZNF568Q3ZCX4 644 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 RAB6CQ53S08 254 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 DCUN1D2Q6PH85 259 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 CYP4X1Q8N118 509 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 OTUD6BQ8N6M0 293 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 THOC1Q96FV9 657 aaKnown RBP10.03□□□□□ -0.8
CUX1-206ENST00000437600 FAM167AQ96KS9 214 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 RAB6CQ9H0N0 254 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 CXCL16Q9H2A7 254 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 ZWILCHQ9H900 591 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 KCNK9Q9NPC2 374 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 CISHQ9NSE2 258 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 CAPN7Q9Y6W3 813 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 H3BRB1 525 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 RASGRF2O14827 1237 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 DYNC1LI2O43237 492 aaPredicted RBP10.02□□□□□ -0.8
CUX1-206ENST00000437600 LGR5O75473 907 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 MAP3K6O95382 1288 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 CYP1A1P04798 512 aaPredicted RBP10.02□□□□□ -0.8
CUX1-206ENST00000437600 CXCL8P10145 99 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 SNRPFP62306 86 aaKnown RBP10.02□□□□□ -0.8
CUX1-206ENST00000437600 IER5Q5VY09 327 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 MFSD7Q6UXD7 560 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 ZBTB8OSQ8IWT0 167 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 WDTC1Q8N5D0 677 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 GDAP1Q8TB36 358 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 TINF2Q9BSI4 451 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.8
CUX1-206ENST00000437600 ADAM7Q9H2U9 754 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 TUT1Q9H6E5 874 aaKnown RBP10.02□□□□□ -0.8
CUX1-206ENST00000437600 MTRF1LQ9UGC7 380 aaKnown RBP10.02□□□□□ -0.8
CUX1-206ENST00000437600 DNPEPQ9ULA0 475 aa10.02□□□□□ -0.8
CUX1-206ENST00000437600 KAT6AQ92794 2004 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 H0YCG3 227 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 PMM2O15305 246 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 TOM1L1O75674 476 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 GH1P01241 217 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 ELNP15502 786 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 IVDP26440 423 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 GAD2Q05329 585 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 PRKCZQ05513 592 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 TRPC3Q13507 836 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 TAF5Q15542 800 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 KCNV1Q6PIU1 500 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 PLPPR4Q7Z2D5 763 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 EFCAB13Q8IY85 973 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 ART4Q93070 314 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 ACO2Q99798 780 aaKnown RBP10.02□□□□□ -0.81
CUX1-206ENST00000437600 OSBPL8Q9BZF1 889 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 HMGXB4Q9UGU5 601 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 ZNF148Q9UQR1 794 aa10.02□□□□□ -0.81
CUX1-206ENST00000437600 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.02□□□□□ -0.81
CUX1-206ENST00000437600 TRIP12Q14669 1992 aaPredicted RBP10.02□□□□□ -0.81
CUX1-206ENST00000437600 TRAPPC3O43617 180 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 STRNO43815 780 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 HBP1O60381 514 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 GRAP2O75791 330 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 C22orf31O95567 290 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 FAM107AO95990 144 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 INHBEP58166 350 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CENPCQ03188 943 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 AUHQ13825 339 aaKnown RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 TADA2BQ86TJ2 420 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 GTF3C2Q8WUA4 911 aaPredicted RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 TMEM174Q8WUU8 243 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 JPH2Q9BR39 696 aaPredicted RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 TMEM121Q9BTD3 319 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 DCLK3Q9C098 648 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 LRRC19Q9H756 370 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 ANAPC5Q9UJX4 755 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CASP8AP2Q9UKL3 1982 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 H0YHG0 523 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 MTA2O94776 668 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 PROSCO94903 275 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 VIMP08670 466 aaKnown RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 RFC1P35251 1148 aaPredicted RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 FLT3LGP49771 235 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 ZNF252P-AS1Q0IIN9 211 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 ACVR2BQ13705 512 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 MXD4Q14582 209 aaPredicted RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 FASTKD3Q14CZ7 662 aaKnown RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 KIZQ2M2Z5 673 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 MORN1Q5T089 497 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 SH3PXD2AQ5TCZ1 1133 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 SLFN12LQ6IEE8 588 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CCDC91Q7Z6B0 441 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 EXOC3L1Q86VI1 746 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms