RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SLC2A7Q6PXP3 512 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 SLC4A10Q6U841 1118 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 TECPR1Q7Z6L1 1165 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 WACQ9BTA9 647 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 SIK2Q9H0K1 926 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 SIDT1Q9NXL6 827 aaKnown RBP4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 LIMCH1Q9UPQ0 1083 aa4.3□□□□□ -1.72
HMGB1P31-201ENST00000437242 H0YIZ8 118 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 F2RL2O00254 374 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 QSOX1O00391 747 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 PPEF2O14830 753 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 VPS4BO75351 444 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 NHLRC4P0CG21 123 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 POU3F3P20264 500 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 MALP21145 153 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 CYP2C19P33261 490 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 IARSP41252 1262 aaKnown RBP4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 KIF23Q02241 960 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 HABP2Q14520 560 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 CNTD1Q8N815 330 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 SLAMF7Q9NQ25 335 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 ELOVL5Q9NYP7 299 aa4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 TMA7Q9Y2S6 64 aaKnown RBP4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 CFAP20Q9Y6A4 193 aaKnown RBP4.29□□□□□ -1.72
HMGB1P31-201ENST00000437242 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 PRRT4C9JH25 899 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 ZNF213O14771 459 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 XPOTO43592 962 aaKnown RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 TOP3BO95985 862 aaKnown RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 MT-CO1P00395 513 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 PDHA1P08559 390 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 VIL1P09327 827 aaKnown RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 EDNRBP24530 442 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 SMARCA1P28370 1054 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 POLGP54098 1239 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 EEFSECP57772 596 aaKnown RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 WDR53Q7Z5U6 358 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 TTC7BQ86TV6 843 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 CNGA4Q8IV77 575 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 FAM109AQ8N4B1 249 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 C1orf162Q8NEQ5 155 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 NSUN6Q8TEA1 469 aaKnown RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 WASF1Q92558 559 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 RGMAQ96B86 450 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 DMRTA2Q96SC8 542 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 VRK1Q99986 396 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 VPS16Q9H269 839 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 GPR35Q9HC97 309 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 SERHLQ9NQF3 203 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 MRPS18AQ9NVS2 196 aaKnown RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 TUBA8Q9NY65 449 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 RAD54BQ9Y620 910 aa4.28□□□□□ -1.72
HMGB1P31-201ENST00000437242 TLDC2A0PJX2 215 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 KLHL33A6NCF5 533 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 KCNU1A8MYU2 1149 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 MYO1FO00160 1098 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 PPM1DO15297 605 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 DNAJB5O75953 348 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 KIF20AO95235 890 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 NTN1O95631 604 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 CBSLP0DN79 551 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 RARBP10826 455 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 CBSP35520 551 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 ARHGAP25P42331 645 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 GCLCP48506 637 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 FOXG1P55316 489 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 SNAPC2Q13487 334 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 KHDC1Q4VXA5 237 aaKnown RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 PXDC1Q5TGL8 231 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 AWAT2Q6E213 333 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 CRELD2Q6UXH1 353 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 ZNF517Q6ZMY9 492 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 HMCESQ96FZ2 354 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 TINAGL1Q9GZM7 467 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 SPRTNQ9H040 489 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 PUS7LQ9H0K6 701 aaKnown RBP4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 MCM8Q9UJA3 840 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 PHLDB1Q86UU1 1377 aa4.27□□□□□ -1.73
HMGB1P31-201ENST00000437242 NT5C1B-RDH14C9J2C7 533 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 SLC16A3O15427 465 aaKnown RBP4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 TLR5O60602 858 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 SFPQP23246 707 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 CYP2C18P33260 490 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 PIK3CGP48736 1102 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 CLCN2P51788 898 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 LAMB3Q13751 1172 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 UAP1L1Q3KQV9 507 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 PCID2Q5JVF3 399 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 SDE2Q6IQ49 451 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 CATSPERGQ6ZRH7 1159 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 PNLDC1Q8NA58 520 aaKnown RBP4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 COA7Q96BR5 231 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 SLC5A4Q9NY91 659 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 DLL3Q9NYJ7 618 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 AGAP1Q9UPQ3 857 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 MRFAP1Q9Y605 127 aa4.26□□□□□ -1.73
HMGB1P31-201ENST00000437242 SMIM35A0A1B0GVV1 85 aa4.25□□□□□ -1.73
HMGB1P31-201ENST00000437242 M0QYG6 137 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms