RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 ANHXE9PGG2 379 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 TMEM189-UBE2V1I3L0A0 370 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 I3L4J1 428 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 PMM2O15305 246 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 CCL16O15467 120 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 NRDCO43847 1150 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 FAM189A1O60320 539 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 AFPP02771 609 aaKnown RBP11.78□□□□□ -0.52
HMGCL-204ENST00000436439 C8AP07357 584 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 SRFP11831 508 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 KRT13P13646 458 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 FGFR3P22607 806 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 BRCC3P46736 316 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 KCNH2Q12809 1159 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 HTR4Q13639 388 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 TRIM14Q14142 442 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 FIGNQ5HY92 759 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 TMC6Q7Z403 805 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 USP37Q86T82 979 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 CCDC105Q8IYK2 499 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 GPR152Q8TDT2 470 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 FGF14Q92915 247 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 CDT1Q9H211 546 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCL-204ENST00000436439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCL-204ENST00000436439 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
HMGCL-204ENST00000436439 PATJQ8NI35 1801 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 CACNA1HO95180 2353 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 SMIM28A0A1B0GU29 152 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 PRR23AA6NEV1 266 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 ZNF233A6NK53 670 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 OGTO15294 1046 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 P4HA2O15460 535 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 MEFVO15553 781 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-204ENST00000436439 B3GAT3O94766 335 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 FSHRP23945 695 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 TKTP29401 623 aaKnown RBP11.77□□□□□ -0.53
HMGCL-204ENST00000436439 OR1D2P34982 312 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 GRM5P41594 1212 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 VAMP7P51809 220 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 OSTNP61366 133 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 CLDN10P78369 228 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 CYP24A1Q07973 514 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 LRMPQ12912 555 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 ANGPT1Q15389 498 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 KYAT1Q16773 422 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 UPP1Q16831 310 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 PPM1LQ5SGD2 360 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 PARM1Q6UWI2 310 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 CRELD2Q6UXH1 353 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-204ENST00000436439 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 DTWD2Q8NBA8 298 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 ITFG1Q8TB96 612 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 PARD3BQ8TEW8 1205 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 NXPE3Q969Y0 559 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
HMGCL-204ENST00000436439 ZBTB45Q96K62 511 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-204ENST00000436439 ZMAT2Q96NC0 199 aaKnown RBP11.77□□□□□ -0.53
HMGCL-204ENST00000436439 RTP3Q9BQQ7 232 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 MSTO1Q9BUK6 570 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 NUP58Q9BVL2 599 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 HCFC1R1Q9NWW0 138 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 MTRRQ9UBK8 725 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 SIK3Q9Y2K2 1263 aa11.77□□□□□ -0.53
HMGCL-204ENST00000436439 FANCMQ8IYD8 2048 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 STK25O00506 426 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 PES1O00541 588 aaKnown RBP11.76□□□□□ -0.53
HMGCL-204ENST00000436439 STX10O60499 249 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 ADRB2P07550 413 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 HNRNPA1P09651 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
HMGCL-204ENST00000436439 MCF2P10911 925 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 HOXA9P31269 272 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 GTF2H1P32780 548 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 ELAVL2Q12926 359 aaKnown RBP11.76□□□□□ -0.53
HMGCL-204ENST00000436439 RAB33AQ14088 237 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 PSMD6Q15008 389 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 ZNF568Q3ZCX4 644 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 XKR4Q5GH76 650 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 DCAF17Q5H9S7 520 aaPredicted RBP11.76□□□□□ -0.53
HMGCL-204ENST00000436439 DNTTIP2Q5QJE6 756 aaKnown RBP11.76□□□□□ -0.53
HMGCL-204ENST00000436439 LIN9Q5TKA1 542 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 DCLRE1AQ6PJP8 1040 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 CBWD2Q8IUF1 395 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 ZSWIM2Q8NEG5 633 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 FAM213AQ9BRX8 229 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 TBC1D17Q9HA65 648 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 KCND1Q9NSA2 647 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 ANKFY1Q9P2R3 1169 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 DNMT3BQ9UBC3 853 aaKnown RBP11.76□□□□□ -0.53
HMGCL-204ENST00000436439 POLIQ9UNA4 740 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 CDY1Q9Y6F8 540 aa11.76□□□□□ -0.53
HMGCL-204ENST00000436439 A0A1W2PQJ5 194 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 DCNP07585 359 aaKnown RBP11.75□□□□□ -0.53
HMGCL-204ENST00000436439 SKILP12757 684 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms