RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 GIPC2Q8TF65 315 aa19.67■□□□□ 0.74
HMGN1-207ENST00000436324 CCDC47Q96A33 483 aaKnown RBP19.67■□□□□ 0.74
HMGN1-207ENST00000436324 ZNF334Q9HCZ1 680 aaPredicted RBP19.67■□□□□ 0.74
HMGN1-207ENST00000436324 TSC2P49815 1807 aa19.67■□□□□ 0.74
HMGN1-207ENST00000436324 A0A1W2PRU2 124 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 PI15O43692 258 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 CST3P01034 146 aaPredicted RBP19.66■□□□□ 0.74
HMGN1-207ENST00000436324 CASP4P49662 377 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 EPHA5P54756 1037 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 MYL7Q01449 175 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 DPYDQ12882 1025 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 SOWAHAQ2M3V2 549 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 TMC8Q8IU68 726 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 TMEM86AQ8N2M4 240 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 TOP6BLQ8N6T0 577 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 LEMD2Q8NC56 503 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 ZNF516Q92618 1163 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 PI4K2AQ9BTU6 479 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 LRRC3Q9BY71 257 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 SLITRK6Q9H5Y7 841 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 SLC2A4RGQ9NR83 387 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 MAPK8IP1Q9UQF2 711 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 PCDHB5Q9Y5E4 795 aa19.66■□□□□ 0.74
HMGN1-207ENST00000436324 ZNF318Q5VUA4 2279 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 ZDBF2Q9HCK1 2354 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 TCHHQ07283 1943 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 GOLGA6L4A6NEF3 574 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 PRPF40AO75400 957 aaKnown RBP19.65■□□□□ 0.74
HMGN1-207ENST00000436324 ECI2O75521 394 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 MICAL2O94851 1124 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 HAPLN1P10915 354 aaPredicted RBP19.65■□□□□ 0.74
HMGN1-207ENST00000436324 CLCN5P51795 746 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 TAF12Q16514 161 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 CCDC142Q17RM4 750 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 ITIH5Q86UX2 942 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 GPIHBP1Q8IV16 184 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 SPPL2BQ8TCT7 592 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 PLEKHO2Q8TD55 490 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 C2orf15Q8WU43 125 aaKnown RBP19.65■□□□□ 0.74
HMGN1-207ENST00000436324 PSMG2Q969U7 264 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 MMS19Q96T76 1030 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 ACBD6Q9BR61 282 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 GZF1Q9H116 711 aaPredicted RBP19.65■□□□□ 0.74
HMGN1-207ENST00000436324 KCTD10Q9H3F6 313 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 TBC1D17Q9HA65 648 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 ZFP14Q9HCL3 533 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 ARHGEF3Q9NR81 526 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 HSFX1Q9UBD0 423 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 ASB3Q9Y575 518 aa19.65■□□□□ 0.74
HMGN1-207ENST00000436324 PHACTR2O75167 634 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 ATF6P18850 670 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 FCARP24071 287 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 LHX1P48742 406 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 GPR15P49685 360 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 NHLH1Q02575 133 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 SMARCB1Q12824 385 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 TCF15Q12870 199 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 TRPC3Q13507 836 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 SNW1Q13573 536 aaKnown RBP19.64■□□□□ 0.73
HMGN1-207ENST00000436324 GRM2Q14416 872 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 VEPH1Q14D04 833 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 INTS6LQ5JSJ4 861 aaKnown RBP19.64■□□□□ 0.73
HMGN1-207ENST00000436324 SDHAF4Q5VUM1 108 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 ZSCAN18Q8TBC5 510 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-207ENST00000436324 ELSPBP1Q96BH3 223 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 ASB16Q96NS5 453 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 PRRX2Q99811 253 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 ATXN3LQ9H3M9 355 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 DMAC2Q9NW81 257 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 GTF3C4Q9UKN8 822 aa19.64■□□□□ 0.73
HMGN1-207ENST00000436324 PDXKO00764 312 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 RHOBTB3O94955 611 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 CLSTN1O94985 981 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 NR3C1P04150 777 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 AOC1P19801 751 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 LMO2P25791 158 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 GABRR2P28476 465 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 VIPR2P41587 438 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 PTPN5P54829 565 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 NFE2Q16621 373 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-207ENST00000436324 STXBP5Q5T5C0 1151 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 CEP135Q66GS9 1140 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 GAREM2Q75VX8 874 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 STKLD1Q8NE28 680 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 SMARCD2Q92925 531 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 TRIOO75962 3097 aa19.63■□□□□ 0.73
HMGN1-207ENST00000436324 KMT2EQ8IZD2 1858 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 MYBPHLA2RUH7 354 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 LRRIQ3A6PVS8 624 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-207ENST00000436324 GABRDO14764 452 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 GALR2O43603 387 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-207ENST00000436324 CALUO43852 315 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-207ENST00000436324 ATP2C2O75185 946 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 PDGFRBP09619 1106 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 CYP2F1P24903 491 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 PCSK1P29120 753 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 MYL6P60660 151 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 PSMC1P62191 440 aaKnown RBP19.62■□□□□ 0.73
HMGN1-207ENST00000436324 BIRC3Q13489 604 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 PNOCQ13519 176 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms