RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ANKS1BQ7Z6G8 1248 aa11□□□□□ -0.65
CD44-210ENST00000434472 TDRPQ86YL5 185 aa11□□□□□ -0.65
CD44-210ENST00000434472 DHX37Q8IY37 1157 aaKnown RBP11□□□□□ -0.65
CD44-210ENST00000434472 FNIP1Q8TF40 1166 aa11□□□□□ -0.65
CD44-210ENST00000434472 RBM15Q96T37 977 aaKnown RBP eCLIP11□□□□□ -0.65
CD44-210ENST00000434472 ELAC2Q9BQ52 826 aaKnown RBP11□□□□□ -0.65
CD44-210ENST00000434472 RPF1Q9H9Y2 349 aaKnown RBP11□□□□□ -0.65
CD44-210ENST00000434472 PCDH9Q9HC56 1237 aa11□□□□□ -0.65
CD44-210ENST00000434472 PTPRHQ9HD43 1115 aa11□□□□□ -0.65
CD44-210ENST00000434472 TNFSF13BQ9Y275 285 aa11□□□□□ -0.65
CD44-210ENST00000434472 IVNS1ABPQ9Y6Y0 642 aa11□□□□□ -0.65
CD44-210ENST00000434472 A0A0G2JLL6 359 aaPredicted RBP10.99□□□□□ -0.65
CD44-210ENST00000434472 SIGLEC16A6NMB1 481 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 RASSF9O75901 435 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 SUN1O94901 812 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 GJB6O95452 261 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 ATICP31939 592 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 CDKN2BP42772 138 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 ASPAP45381 313 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 IFNAR2P48551 515 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 ARSEP51690 589 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 HIRAP54198 1017 aaPredicted RBP10.99□□□□□ -0.65
CD44-210ENST00000434472 ZNF252P-AS1Q0IIN9 211 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
CD44-210ENST00000434472 ZNF268Q14587 947 aaPredicted RBP10.99□□□□□ -0.65
CD44-210ENST00000434472 ACAP1Q15027 740 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 RASA2Q15283 850 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 LY6KQ17RY6 165 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 ZNF667Q5HYK9 610 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 DAB2IPQ5VWQ8 1189 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 ICE2Q659A1 982 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 PRRT2Q7Z6L0 340 aaPredicted RBP10.99□□□□□ -0.65
CD44-210ENST00000434472 THNSL1Q8IYQ7 743 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 TTC39CQ8N584 583 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 WDTC1Q8N5D0 677 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 GRAMD1AQ96CP6 724 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 SGSM3Q96HU1 749 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 NFKBIZQ9BYH8 718 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 FAM124BQ9H5Z6 455 aaPredicted RBP10.99□□□□□ -0.65
CD44-210ENST00000434472 CYP3A43Q9HB55 503 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 SLC40A1Q9NP59 571 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 SAYSD1Q9NPB0 183 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 PRMT7Q9NVM4 692 aaPredicted RBP10.99□□□□□ -0.65
CD44-210ENST00000434472 SENP1Q9P0U3 644 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 DNPEPQ9ULA0 475 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 SHOC2Q9UQ13 582 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 NAALADL1Q9UQQ1 740 aa10.99□□□□□ -0.65
CD44-210ENST00000434472 LRRD1A4D1F6 860 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 TTLL13PA6NNM8 815 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 F8VP50 259 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 INO80B-WBP1J3KQ70 363 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 DNM1LO00429 736 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 SNX3O60493 162 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 CNMDO75829 334 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 WEE2P0C1S8 567 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 MCF2P10911 925 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 KRT3P12035 628 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 KRT10P13645 584 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 P4HA1P13674 534 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 CD19P15391 556 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 OSBPP22059 807 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 PSMA2P25787 234 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 STX2P32856 288 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 SLC18A1P54219 525 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 IL9RQ01113 521 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 KCTD2Q14681 263 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 OASLQ15646 514 aaKnown RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 ATP13A4Q4VNC1 1196 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ZNF484Q5JVG2 852 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 CENPUQ71F23 418 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 RHPN2Q8IUC4 686 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 LRRC71Q8N4P6 559 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 GBP7Q8N8V2 638 aaPredicted RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 DCPSQ96C86 337 aaKnown RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 MAGEB18Q96M61 343 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 SPATA33Q96N06 139 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 BCO2Q9BYV7 579 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 INO80BQ9C086 356 aaPredicted RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 MIS12Q9H081 205 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 XYLT2Q9H1B5 865 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 KLC4Q9NSK0 619 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 DNAJC17Q9NVM6 304 aaKnown RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 AGTPBP1Q9UPW5 1226 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 USP15Q9Y4E8 981 aaPredicted RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 EXOC1LA0A1B0GW35 172 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 CFAP73A6NFT4 308 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ZBTB42B2RXF5 422 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ALOX15BO15296 676 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ARIH2O95376 493 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 OAS1P00973 400 aaKnown RBP10.98□□□□□ -0.65
CD44-210ENST00000434472 MARK3P27448 753 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 PHKA2P46019 1235 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 OGDHQ02218 1023 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 GPS1Q13098 491 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 XRCC4Q13426 336 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 FAM187BQ17R55 369 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 CCDC142Q17RM4 750 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 ZNF394Q53GI3 561 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 DENND1BQ6P3S1 775 aa10.98□□□□□ -0.65
CD44-210ENST00000434472 SCARA5Q6ZMJ2 495 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms