RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 MRPL4Q9BYD3 311 aaKnown RBP14.41□□□□□ -0.1
COL6A3-207ENST00000433762 TXLNGQ9NUQ3 528 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 AGAP1Q9UPQ3 857 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 KRT7P08729 469 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 GCAP28676 217 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 ARSEP51690 589 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 ZNF252P-AS1Q0IIN9 211 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 ACAP1Q15027 740 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 PDK4Q16654 411 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 EFHC2Q5JST6 749 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 PASD1Q8IV76 773 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 FAM124BQ9H5Z6 455 aaPredicted RBP14.41□□□□□ -0.1
COL6A3-207ENST00000433762 EBF2Q9HAK2 575 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 WDR35Q9P2L0 1181 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 USTQ9Y2C2 406 aa14.41□□□□□ -0.1
COL6A3-207ENST00000433762 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
COL6A3-207ENST00000433762 OGTO15294 1046 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 TGFB3P10600 412 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 PHBP35232 272 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 VPS41P49754 854 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 CAPSQ13938 189 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 TMED2Q15363 201 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 DUOXA2Q1HG44 320 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 FAM133BQ5BKY9 247 aaKnown RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 IER5Q5VY09 327 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 DCUN1D2Q6PH85 259 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 TCP11Q8WWU5 503 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 KLHL29Q96CT2 875 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 ANKRD27Q96NW4 1050 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 RAB3IPQ96QF0 476 aaPredicted RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 PITPNM3Q9BZ71 974 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 C2orf40Q9H1Z8 148 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 PSMC3IPQ9P2W1 217 aaPredicted RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 USH1CQ9Y6N9 552 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 PECAM1P16284 738 aaPredicted RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 SSR1P43307 286 aaKnown RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 WDR4P57081 412 aaKnown RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 RPL7AP62424 266 aaKnown RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 LLGL1Q15334 1064 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 PARP6Q2NL67 630 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 SH3D19Q5HYK7 790 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 CGB2Q6NT52 195 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 BBS12Q6ZW61 710 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 APOBEC3FQ8IUX4 373 aaKnown RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 PRCCQ92733 491 aaPredicted RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 ELMO3Q96BJ8 720 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 ALKBH8Q96BT7 664 aaKnown RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 ZBTB45Q96K62 511 aaPredicted RBP14.4□□□□□ -0.1
COL6A3-207ENST00000433762 SMC6Q96SB8 1091 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 TRABDQ9H4I3 376 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
COL6A3-207ENST00000433762 SIGLEC16A6NMB1 481 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 E7ESA3 106 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 MED7O43513 233 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 MSCO60682 206 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 DCTN3O75935 186 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 UNC5CO95185 931 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 ZWINTO95229 277 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 GH1P01241 217 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 CCND1P24385 295 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 EDNRBP24530 442 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 NF2P35240 595 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 SP2Q02086 613 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 GPS1Q13098 491 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 MXD4Q14582 209 aaPredicted RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 C2CD6Q53TS8 623 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 ERICH1Q86X53 443 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 PPIL6Q8IXY8 311 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 FITM2Q8N6M3 262 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 GDAP1Q8TB36 358 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 MCEEQ96PE7 176 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 FHDC1Q9C0D6 1143 aaPredicted RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 DNAJC17Q9NVM6 304 aaKnown RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 ANKFY1Q9P2R3 1169 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 HACL1Q9UJ83 578 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 RPL26L1Q9UNX3 145 aaKnown RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 PPP2R3BQ9Y5P8 575 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 HNRNPCL1O60812 293 aaKnown RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 ATF7P17544 494 aaPredicted RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 ALDH3A1P30838 453 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 SETDB1Q15047 1291 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 HADHQ16836 314 aaKnown RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 KLHL38Q2WGJ6 581 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 TBC1D1Q86TI0 1168 aaPredicted RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 CFAP61Q8NHU2 1237 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 GIMAP7Q8NHV1 300 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 INPP5DQ92835 1189 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 TMEM237Q96Q45 408 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 DHRS4Q9BTZ2 278 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 CISHQ9NSE2 258 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
COL6A3-207ENST00000433762 SNCAIPQ9Y6H5 919 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 LTBP3Q9NS15 1303 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 PTPRFP10586 1907 aa14.39□□□□□ -0.11
COL6A3-207ENST00000433762 C3orf70A6NLC5 250 aaPredicted RBP14.38□□□□□ -0.11
COL6A3-207ENST00000433762 SPDYE16A6NNV3 312 aaPredicted RBP14.38□□□□□ -0.11
COL6A3-207ENST00000433762 TYROBPO43914 113 aa14.38□□□□□ -0.11
COL6A3-207ENST00000433762 B4GALT4O60513 344 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms