RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 LETM2Q2VYF4 491 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 HABP4Q5JVS0 413 aaKnown RBP8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SH2D4BQ5SQS7 431 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SLC39A5Q6ZMH5 540 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 PPP4R3CPQ6ZMV5 832 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 NEK8Q86SG6 692 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 KBTBD2Q8IY47 623 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 ADGRF4Q8IZF3 695 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 ZDHHC14Q8IZN3 488 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 ZNF398Q8TD17 642 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 PPP1R14BQ96C90 147 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 MTMR9Q96QG7 549 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SIX2Q9NPC8 291 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 PCDHA2Q9Y5H9 948 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 UMODL1Q5DID0 1318 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 IGSF9BQ9UPX0 1349 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 C2CD2LO14523 706 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 CDH16O75309 829 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 TMCC1O94876 653 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 ACSL3O95573 720 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 TTC4O95801 387 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 PABPC4LP0CB38 370 aaKnown RBP8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 CPT1AP50416 773 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SLC18A1P54219 525 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 RTP1P59025 263 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 USP46P62068 366 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 BAATQ14032 418 aaPredicted RBP8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SLC35G1Q2M3R5 365 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 TMEM63BQ5T3F8 832 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 GJC2Q5T442 439 aaPredicted RBP8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 FRMD5Q7Z6J6 570 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 TRIM42Q8IWZ5 723 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 CYP4X1Q8N118 509 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 C12orf50Q8NA57 414 aaPredicted RBP8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 NSUN6Q8TEA1 469 aaKnown RBP8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 CDK5RAP3Q96JB5 506 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 TOX2Q96NM4 488 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SLX1AQ9BQ83 275 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SYT11Q9BT88 431 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SYNCQ9H7C4 482 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 WHRNQ9P202 907 aa8.13□□□□□ -1.11
CNKSR3-202ENST00000433165 SOWAHBA6NEL2 793 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 FAM47DPA6NHR8 397 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 FOXO6A8MYZ6 492 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 CCDC22O60826 627 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ADAMTS4O75173 837 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 LGR5O75473 907 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ECEL1O95672 775 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ASLP04424 464 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 SPATA31D3P0C874 917 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 PIM1P11309 404 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 COILP38432 576 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 CD151P48509 253 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 BPIFB4P59827 614 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 GHRHRQ02643 423 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 EPHA7Q15375 998 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 TAF1BQ53T94 588 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 PRAMEF19Q5SWL8 479 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 SPATA31D4Q6ZUB0 917 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 MARK2Q7KZI7 788 aaKnown RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 HS2ST1Q7LGA3 356 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 KCNK18Q7Z418 384 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 CCDC25Q86WR0 208 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 KLHDC9Q8NEP7 349 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 DENND1AQ8TEH3 1009 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 CTNNBL1Q8WYA6 563 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 SLCO2A1Q92959 643 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 HIC2Q96JB3 615 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 BTBD10Q9BSF8 475 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 STARD7Q9NQZ5 370 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 HSFX1Q9UBD0 423 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 MAD2L2Q9UI95 211 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ZFP69BQ9UJL9 534 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 AJAP1Q9UKB5 411 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 KIAA0100Q14667 2235 aaKnown RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 PNMA6FA0A0J9YX94 578 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 RBM47A0AV96 593 aaKnown RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 hCG_1984214I3L0E3 225 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 PRPF4O43172 522 aaKnown RBP eCLIP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 CYTH3O43739 400 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ATP9BO43861 1147 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 STAM2O75886 525 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ZWINTO95229 277 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 C6orf222P0C671 652 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 UBTFL6P0CB48 400 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ADCYAP1R1P41586 468 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 ACLYP53396 1101 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 DEUP1Q05D60 604 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 SULT2A1Q06520 285 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 CALCOCO2Q13137 446 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 DNAJC3Q13217 504 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 TTLL4Q14679 1199 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 PDK4Q16654 411 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 QRICH1Q2TAL8 776 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 C11orf63Q6NUN7 778 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 CHRDL2Q6WN34 429 aa8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 EPM2AIP1Q7L775 607 aaPredicted RBP8.12□□□□□ -1.11
CNKSR3-202ENST00000433165 HEATR3Q7Z4Q2 680 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms