RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 STRA6Q9BX79 667 aa17.46■□□□□ 0.39
ACTB-205ENST00000432588 IKZF4Q9H2S9 585 aa17.46■□□□□ 0.39
ACTB-205ENST00000432588 OLFML3Q9NRN5 406 aa17.46■□□□□ 0.39
ACTB-205ENST00000432588 ABI2Q9NYB9 513 aaPredicted RBP17.46■□□□□ 0.39
ACTB-205ENST00000432588 TBC1D7Q9P0N9 293 aa17.46■□□□□ 0.39
ACTB-205ENST00000432588 ZMYM5Q9UJ78 669 aa17.46■□□□□ 0.39
ACTB-205ENST00000432588 COL4A2P08572 1712 aa17.46■□□□□ 0.39
ACTB-205ENST00000432588 DNAH14Q0VDD8 3507 aa17.46■□□□□ 0.38
ACTB-205ENST00000432588 TSC2P49815 1807 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 CHRNB1P11230 501 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 ATF6P18850 670 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 GARTP22102 1010 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 PLCB2Q00722 1185 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 TSPY1Q01534 308 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 KCNA1Q09470 495 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 RALGPS2Q86X27 583 aaPredicted RBP17.45■□□□□ 0.38
ACTB-205ENST00000432588 MKNK1Q9BUB5 465 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 THG1LQ9NWX6 298 aaKnown RBP17.45■□□□□ 0.38
ACTB-205ENST00000432588 RBAKQ9NYW8 714 aaPredicted RBP17.45■□□□□ 0.38
ACTB-205ENST00000432588 RAB23Q9ULC3 237 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 PCDHB5Q9Y5E4 795 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 CEP250Q9BV73 2442 aa17.45■□□□□ 0.38
ACTB-205ENST00000432588 HAPLN1P10915 354 aaPredicted RBP17.44■□□□□ 0.38
ACTB-205ENST00000432588 POLR2BP30876 1174 aaKnown RBP17.44■□□□□ 0.38
ACTB-205ENST00000432588 CXCL12P48061 93 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 PUM1Q14671 1186 aaKnown RBP eCLIP17.44■□□□□ 0.385e-11■■■□□ 18.4
ACTB-205ENST00000432588 NFE2Q16621 373 aaPredicted RBP17.44■□□□□ 0.38
ACTB-205ENST00000432588 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 DGLUCYQ7Z3D6 616 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 LRRTM3Q86VH5 581 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 GPIHBP1Q8IV16 184 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 BRSK2Q8IWQ3 736 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 BPIFB1Q8TDL5 484 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 GIPC2Q8TF65 315 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 SAAL1Q96ER3 474 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 INTS4Q96HW7 963 aaKnown RBP17.44■□□□□ 0.38
ACTB-205ENST00000432588 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 MORC2Q9Y6X9 1032 aaPredicted RBP17.44■□□□□ 0.38
ACTB-205ENST00000432588 ANK1P16157 1881 aa17.44■□□□□ 0.38
ACTB-205ENST00000432588 SCN1AP35498 2009 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 MYBPHLA2RUH7 354 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 SPECC1L-ADORA2AF8WAN1 911 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 HUS1O60921 280 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 ITGB3P05106 788 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 SDHBP21912 280 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 CTHP32929 405 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 CDR1P51861 262 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 CYP4F8P98187 520 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 DGKKQ5KSL6 1271 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 SPEM1Q8N4L4 309 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 CELF5Q8N6W0 485 aaKnown RBP17.43■□□□□ 0.38
ACTB-205ENST00000432588 LRRC52Q8N7C0 313 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 ZFYVE19Q96K21 471 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 LRRC3BQ96PB8 259 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
ACTB-205ENST00000432588 TMEM206Q9H813 350 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 IL21Q9HBE4 155 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 GTSE1Q9NYZ3 720 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 GMEB2Q9UKD1 530 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 ITGA11Q9UKX5 1188 aa17.43■□□□□ 0.38
ACTB-205ENST00000432588 R3HCC1Q9Y3T6 440 aaKnown RBP17.43■□□□□ 0.38
ACTB-205ENST00000432588 FRMD3A2A2Y4 597 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 EXTL3O43909 919 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 PRAMEF12O95522 483 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 TDGF1P13385 188 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 DDX6P26196 483 aaKnown RBP eCLIP17.42■□□□□ 0.383e-35■■□□□ 11.9
ACTB-205ENST00000432588 AVPR1AP37288 418 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 SOX9P48436 509 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 CASP5P51878 434 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 STXBP4Q6ZWJ1 553 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 CCDC65Q8IXS2 484 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 CMTM8Q8IZV2 173 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 TMEM86AQ8N2M4 240 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 PDCL2Q8N4E4 241 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 CSGALNACT2Q8N6G5 542 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 C1orf127Q8N9H9 656 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
ACTB-205ENST00000432588 ACBD6Q9BR61 282 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 SLC46A2Q9BY10 475 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
ACTB-205ENST00000432588 KIAA0391O15091 583 aaKnown RBP17.41■□□□□ 0.38
ACTB-205ENST00000432588 PRPF40AO75400 957 aaKnown RBP17.41■□□□□ 0.38
ACTB-205ENST00000432588 KRT19P08727 400 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 MYL7Q01449 175 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 SATB1Q01826 763 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 BFSP1Q12934 665 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 ITPRIPL2Q3MIP1 535 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 TTC8Q8TAM2 541 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 SPATA18Q8TC71 538 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 LEO1Q8WVC0 666 aaPredicted RBP17.41■□□□□ 0.38
ACTB-205ENST00000432588 USP28Q96RU2 1077 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 CBWD1Q9BRT8 395 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 LRRC27Q9C0I9 530 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 ABCB6Q9NP58 842 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 DDX43Q9NXZ2 648 aaKnown RBP17.41■□□□□ 0.38
ACTB-205ENST00000432588 DLL3Q9NYJ7 618 aa17.41■□□□□ 0.38
ACTB-205ENST00000432588 UXTQ9UBK9 157 aaPredicted RBP17.41■□□□□ 0.38
ACTB-205ENST00000432588 L1RE1Q9UN81 338 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms