RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 COILP38432 576 aaPredicted RBP12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 BNIPLQ7Z465 357 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 PLEKHA8Q96JA3 519 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 MAGEB18Q96M61 343 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 MUC3BQ9H195 1237 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 PDP2Q9P2J9 529 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 INO80Q9ULG1 1556 aaPredicted RBP12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 LAMC2Q13753 1193 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 CRYMQ14894 314 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 WLSQ5T9L3 541 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 KLHL4Q9C0H6 718 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 ABT1Q9ULW3 272 aaKnown RBP12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 MADDQ8WXG6 1647 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 ACADSP16219 412 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 KLRC1P26715 233 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 PSMD7P51665 324 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 ARHGAP17Q68EM7 881 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 CCDC33Q8N5R6 958 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 SLC7A14Q8TBB6 771 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 ANKS1AQ92625 1134 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 SERPINB12Q96P63 405 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 CCSER1Q9C0I3 900 aa12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 RPAP3Q9H6T3 665 aaPredicted RBP12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
RIMKLA-202ENST00000431473 HMBSP08397 361 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 TMEM62Q0P6H9 643 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 NUMA1Q14980 2115 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 ALX1Q15699 326 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 ZNF513Q8N8E2 541 aaPredicted RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 CELF1Q92879 486 aaKnown RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 SH3GL1Q99961 368 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 C10orf88Q9H8K7 445 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 COL15A1P39059 1388 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 LRRIQ3A6PVS8 624 aaPredicted RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 SKAP2O75563 359 aaPredicted RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 TFE3P19532 575 aaPredicted RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 SPRP35270 261 aaPredicted RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 SOX6P35712 828 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 CSE1LP55060 971 aaKnown RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 SPATA2LQ8IUW3 424 aaPredicted RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 PPIL6Q8IXY8 311 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 WDR48Q8TAF3 677 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 KLHL25Q9H0H3 589 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 GON4LQ3T8J9 2241 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 MAPRE1Q15691 268 aaKnown RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 PLEKHA7Q6IQ23 1121 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 ADCK2Q7Z695 626 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 C11orf96Q7Z7L8 435 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 TTC39CQ8N584 583 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 RBBP8NLQ8NC74 664 aaPredicted RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 CD209Q9NNX6 404 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 ANKS3Q6ZW76 656 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 DDX53Q86TM3 631 aaKnown RBP12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 AGAP1Q9UPQ3 857 aa12.21□□□□□ -0.45
RIMKLA-202ENST00000431473 AP3B1O00203 1094 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 PDE5AO76074 875 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 AP3M2P53677 418 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 PLA2G4FQ68DD2 849 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 TNIP3Q96KP6 325 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 SLC7A5P2Q9GIP4 190 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 NDEL1Q9GZM8 345 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 THAP2Q9H0W7 228 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 DTNAQ9Y4J8 743 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 GUCA1CO95843 209 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 TSGA10IPQ3SY00 556 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 CIAPIN1Q6FI81 312 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 LUZP2Q86TE4 346 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 EFHBQ8N7U6 833 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 TRIM62Q9BVG3 475 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 PIF1Q9H611 641 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 SNX9Q9Y5X1 595 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 STK25O00506 426 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 CST8O60676 142 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 PRKCBP05771 671 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 ETFBP38117 255 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 UGP2Q16851 508 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 IMPAD1Q9NX62 359 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 CDHR2Q9BYE9 1310 aa12.21□□□□□ -0.46
RIMKLA-202ENST00000431473 MTDHQ86UE4 582 aaKnown RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 UBA3Q8TBC4 463 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 PPCSQ9HAB8 311 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 PAK5Q9P286 719 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 MAP3K6O95382 1288 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 CENPAP49450 140 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 OTOAQ7RTW8 1153 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 TFB1MQ8WVM0 346 aaKnown RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 MED15Q96RN5 788 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 ZNF197O14709 1029 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 RAB14P61106 215 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 HIST1H2AGP0C0S8 130 aaPredicted RBP12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 ZNF23P17027 643 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 HIST1H2ADP20671 130 aa12.2□□□□□ -0.46
RIMKLA-202ENST00000431473 P3H2Q8IVL5 708 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms