RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 ANP32AP39687 249 aaKnown RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 VEPH1Q14D04 833 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 COBLL1Q53SF7 1204 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 ZNF658Q5TYW1 1059 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 PARM1Q6UWI2 310 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 LIMS2Q7Z4I7 341 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 ITIH5Q86UX2 942 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 SUGP1Q8IWZ8 645 aaKnown RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 FBXL6Q8N531 539 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 SPATA20Q8TB22 786 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 PLEKHO2Q8TD55 490 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 ING5Q8WYH8 240 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 FGF14Q92915 247 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 SMARCE1Q969G3 411 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 PSMG2Q969U7 264 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 SYAP1Q96A49 352 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 MMS19Q96T76 1030 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 SEPT5Q99719 369 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 DNAJC25Q9H1X3 360 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 CHMP5Q9NZZ3 219 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 MAPK8IP1Q9UQF2 711 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 PCDHB5Q9Y5E4 795 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 TECTAO75443 2155 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 IKBKBO14920 756 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 NARSO43776 548 aaKnown RBP10.52□□□□□ -0.73
HDAC6-207ENST00000430858 KINO60870 393 aaKnown RBP10.52□□□□□ -0.73
HDAC6-207ENST00000430858 TACC1O75410 805 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 FGF19O95750 216 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 C4BPAP04003 597 aaKnown RBP10.52□□□□□ -0.73
HDAC6-207ENST00000430858 MYL4P12829 197 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 CEBPBP17676 345 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 WARSP23381 471 aaKnown RBP10.52□□□□□ -0.73
HDAC6-207ENST00000430858 CCR2P41597 374 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 CASP4P49662 377 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 MYL6P60660 151 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 TNNC1P63316 161 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 ENPEPQ07075 957 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 BIRC3Q13489 604 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 EDRF1Q3B7T1 1238 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 WDR72Q3MJ13 1102 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 ZCWPW2Q504Y3 356 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 TDRD10Q5VZ19 366 aaKnown RBP10.52□□□□□ -0.73
HDAC6-207ENST00000430858 INTS8Q75QN2 995 aaKnown RBP10.52□□□□□ -0.73
HDAC6-207ENST00000430858 DNAJB7Q7Z6W7 309 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-207ENST00000430858 OSTM1Q86WC4 334 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 TMC8Q8IU68 726 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 FAM200AQ8TCP9 573 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 TCEAL4Q96EI5 215 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 MCRS1Q96EZ8 462 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 LRRC3Q9BY71 257 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 GPR88Q9GZN0 384 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 KCNH6Q9H252 994 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 VRTNQ9H8Y1 702 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 ABCB6Q9NP58 842 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 TMLHEQ9NVH6 421 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 WNT16Q9UBV4 365 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 FBXL21Q9UKT6 434 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 CDH9Q9ULB4 789 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 PCDHA5Q9Y5H7 936 aa10.52□□□□□ -0.73
HDAC6-207ENST00000430858 MOSPD3O75425 235 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 ECI2O75521 394 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 SOAT2O75908 522 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 AKAP3O75969 853 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 ATF6P18850 670 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 ACAT1P24752 427 aaKnown RBP10.51□□□□□ -0.73
HDAC6-207ENST00000430858 PSMC2P35998 433 aaKnown RBP10.51□□□□□ -0.73
HDAC6-207ENST00000430858 VAMP7P51809 220 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 DLG4P78352 724 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 ADAM9Q13443 819 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 NCOA4Q13772 614 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 MAPRE1Q15691 268 aaKnown RBP10.51□□□□□ -0.73
HDAC6-207ENST00000430858 ZACNQ401N2 412 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 CFAP221Q4G0U5 840 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 FAM171BQ6P995 826 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 SMYD4Q8IYR2 804 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-207ENST00000430858 KBTBD7Q8WVZ9 684 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 FUBP3Q96I24 572 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC6-207ENST00000430858 PKMYT1Q99640 499 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 LPIN3Q9BQK8 851 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 SYT15Q9BQS2 421 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 MKNK1Q9BUB5 465 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 RPP25Q9BUL9 199 aaKnown RBP10.51□□□□□ -0.73
HDAC6-207ENST00000430858 XYLT2Q9H1B5 865 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 SNX25Q9H3E2 840 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 MFSD1Q9H3U5 465 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 SLC2A4RGQ9NR83 387 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 GTF3C4Q9UKN8 822 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 TSC2P49815 1807 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 DOCK8Q8NF50 2099 aa10.51□□□□□ -0.73
HDAC6-207ENST00000430858 MYO10Q9HD67 2058 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 MYBPHLA2RUH7 354 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 GADD45BO75293 160 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-207ENST00000430858 CFHP08603 1231 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms