RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.56□□□□□ -1.04
ECHDC1-207ENST00000430841 ZFYVE26Q68DK2 2539 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 NOTCH4Q99466 2003 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 CCDC163A0A0D9SF12 145 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 MYBPHLA2RUH7 354 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 K7ESF4 209 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 M0R2N6 131 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 XPOTO43592 962 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 EDIL3O43854 480 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 ABLIM3O94929 683 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 CAVIN2O95810 425 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 HOXA6P31267 233 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 HSPA4P34932 840 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 PXNP49023 591 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 MCM2P49736 904 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 STRN3Q13033 797 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 PSMD2Q13200 908 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 DMP1Q13316 513 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 GNL2Q13823 731 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 SAFBQ15424 915 aaKnown RBP eCLIP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 UAP1L1Q3KQV9 507 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 DSTYKQ6XUX3 929 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 SND1Q7KZF4 910 aaKnown RBP eCLIP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 RUFY3Q7L099 469 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 TTC16Q8NEE8 873 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 CCDC26Q8TAB7 109 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 BPIFB1Q8TDL5 484 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 AIFM3Q96NN9 605 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 TMEM209Q96SK2 561 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 LSM14BQ9BX40 385 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 MRPL4Q9BYD3 311 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 VRTNQ9H8Y1 702 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 TMEM9BQ9NQ34 198 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 ASB3Q9Y575 518 aa8.55□□□□□ -1.04
ECHDC1-207ENST00000430841 STK36Q9NRP7 1315 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 COL4A2P08572 1712 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 SDK1Q7Z5N4 2213 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 OR6C75A6NL08 312 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 C4orf47A7E2U8 309 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 C1QTNF9BB2RNN3 333 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 KHNYNO15037 678 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 SEC24AO95486 1093 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 APBB3O95704 486 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 C1QTNF9P0C862 333 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 GABRR2P28476 465 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 CDC25CP30307 473 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 AVPR1AP37288 418 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 GRM5P41594 1212 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 CCR2P41597 374 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 ATXN3P54252 364 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 FCHO2Q0JRZ9 810 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 NAB2Q15742 525 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 SH3PXD2AQ5TCZ1 1133 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 EEF1DP3Q658K8 133 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 LMBRD2Q68DH5 695 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 ARID3BQ8IVW6 561 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 CAMKK1Q8N5S9 505 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 SHKBP1Q8TBC3 707 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 BICD1Q96G01 975 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 ZFYVE19Q96K21 471 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 SUSD3Q96L08 255 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 ZSWIM3Q96MP5 696 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 TBC1D32Q96NH3 1257 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 PGLYRP2Q96PD5 576 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 HSD17B14Q9BPX1 270 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 AGXT2Q9BYV1 514 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 SMOC1Q9H4F8 434 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 PDRG1Q9NUG6 133 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 OBP2AQ9NY56 170 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 GTSE1Q9NYZ3 720 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 ANKFY1Q9P2R3 1169 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 ORC3Q9UBD5 711 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 ZMYM5Q9UJ78 669 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 TNFSF13BQ9Y275 285 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 PKD1L2Q7Z442 2459 aa8.54□□□□□ -1.04
ECHDC1-207ENST00000430841 NUP210Q8TEM1 1887 aaPredicted RBP8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 CITO14578 2027 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 EXTL3O43909 919 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 MCF2P10911 925 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 ODC1P11926 461 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 CYP11B2P19099 503 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 MCM7P33993 719 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 RAP1GAPP47736 663 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 DGKEP52429 567 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 EPHA5P54756 1037 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 ELOAQ14241 798 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 GAS6Q14393 721 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 FBXO43Q4G163 708 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 ZNF385CQ66K41 422 aaPredicted RBP8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 TTC30AQ86WT1 665 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 CPA6Q8N4T0 437 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
ECHDC1-207ENST00000430841 TSTD1Q8NFU3 115 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms