RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 AVILO75366 819 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TOP3BO95985 862 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 IFNB1P01574 187 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 KRT1P04264 644 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 NR3C2P08235 984 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GLRA2P23416 452 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 OASLQ15646 514 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 SMAD1Q15797 465 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ARHGEF16Q5VV41 709 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 PLEKHA7Q6IQ23 1121 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 NPNTQ6UXI9 565 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TAOK1Q7L7X3 1001 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 OTOAQ7RTW8 1153 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TTC7BQ86TV6 843 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 FAM160B2Q86V87 743 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ABRAQ8N0Z2 381 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 CCDC33Q8N5R6 958 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 FBXO27Q8NI29 283 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TMC2Q8TDI7 906 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 C10orf82Q8WW14 230 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF606Q8WXB4 792 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 CNKSR1Q969H4 720 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 PIWIL1Q96J94 861 aaKnown RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 MAGEB18Q96M61 343 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 MAGEB5Q9BZ81 275 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ROPN1BQ9BZX4 212 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 MTMR12Q9C0I1 747 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 TRABDQ9H4I3 376 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 ROPN1Q9HAT0 212 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-202ENST00000430711 RXFP1Q9HBX9 757 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 RNF146Q9NTX7 359 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 SLC5A4Q9NY91 659 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 DCTN4Q9UJW0 460 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 PHTF1Q9UMS5 762 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 POLIQ9UNA4 740 aa7.58□□□□□ -1.2
COL28A1-202ENST00000430711 GSTTP1A0A1W2PQM5 241 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 VWA5AO00534 786 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 MAPK13O15264 365 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CSDE1O75534 798 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 SUN1O94901 812 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CCNB1P14635 433 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 KCNA3P22001 575 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 GMPRP36959 345 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ACTR2P61160 394 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 OSTNP61366 133 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CNTN2Q02246 1040 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CXCL9Q07325 125 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 NAA25Q14CX7 972 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CCNG2Q16589 344 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 BRDTQ58F21 947 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ZFYVE27Q5T4F4 411 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 RNASEH2BQ5TBB1 312 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 STYK1Q6J9G0 422 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF365Q70YC5 407 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 BZW1Q7L1Q6 419 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 VSIG10LQ86VR7 867 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 TRIM50Q86XT4 487 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 LARGE2Q8N3Y3 721 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ZCCHC9Q8N567 271 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 FAM13CQ8NE31 585 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 MZB1Q8WU39 189 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 RUNDC3BQ96NL0 473 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 NTPCRQ9BSD7 190 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PITPNM3Q9BZ71 974 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 TMX4Q9H1E5 349 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ASCC2Q9H1I8 757 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 AVENQ9NQS1 362 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CYP26B1Q9NR63 512 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 FBXO6Q9NRD1 293 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 RBAKQ9NYW8 714 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF148Q9UQR1 794 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PCDHB2Q9Y5E7 798 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PCDHA10Q9Y5I2 948 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 NR2E3Q9Y5X4 410 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PAPPA2Q9BXP8 1791 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 hCG_1818297A0A087WSY0 165 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 FAM47DPA6NHR8 397 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 LRRIQ4A6NIV6 560 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 DNALI1O14645 258 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 TYROBPO43914 113 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 FAM189A1O60320 539 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PLA2G6O60733 806 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CDH16O75309 829 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 UNC5CO95185 931 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 GAS8O95995 478 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 F7P08709 466 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 LIG4P49917 911 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 CDH8P55286 799 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 MYL6P60660 151 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PDIA2Q13087 525 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 EMC2Q15006 297 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PRPF38BQ5VTL8 546 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 TRNP1Q6NT89 227 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 DENND1BQ6P3S1 775 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 SPOCD1Q6ZMY3 1216 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 UNC45BQ8IWX7 931 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 KATNAL2Q8IYT4 538 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms