RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 LMBRD2Q68DH5 695 aaPredicted RBP17.54■□□□□ 0.4
PTPRA-206ENST00000430705 TSSK4Q6SA08 328 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 ARID3BQ8IVW6 561 aaPredicted RBP17.54■□□□□ 0.4
PTPRA-206ENST00000430705 SUMF1Q8NBK3 374 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 GIPC2Q8TF65 315 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 SNX21Q969T3 373 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 ZNF560Q96MR9 790 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 TRIM9Q9C026 710 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 MTMR12Q9C0I1 747 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 ATXN3LQ9H3M9 355 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 PDE11AQ9HCR9 933 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 AGAP1Q9UPQ3 857 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 EP300Q09472 2414 aaPredicted RBP17.54■□□□□ 0.4
PTPRA-206ENST00000430705 GPR179Q6PRD1 2367 aa17.54■□□□□ 0.4
PTPRA-206ENST00000430705 PTPRZ1P23471 2315 aaPredicted RBP17.54■□□□□ 0.4
PTPRA-206ENST00000430705 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 HMGA1P17096 107 aaKnown RBP17.53■□□□□ 0.4
PTPRA-206ENST00000430705 SOX9P48436 509 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 GPR158Q5T848 1215 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 FOXD4L5Q5VV16 416 aaPredicted RBP17.53■□□□□ 0.4
PTPRA-206ENST00000430705 EPM2AIP1Q7L775 607 aaPredicted RBP17.53■□□□□ 0.4
PTPRA-206ENST00000430705 METTL23Q86XA0 190 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 SYCP3Q8IZU3 236 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 OR5B17Q8NGF7 314 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
PTPRA-206ENST00000430705 ZFYVE19Q96K21 471 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 NELL2Q99435 816 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 GPR88Q9GZN0 384 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 CHRDQ9H2X0 955 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 SEMA4AQ9H3S1 761 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 ABI2Q9NYB9 513 aaPredicted RBP17.53■□□□□ 0.4
PTPRA-206ENST00000430705 F5P12259 2224 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 CACNA1AO00555 2505 aa17.53■□□□□ 0.4
PTPRA-206ENST00000430705 ZNF263O14978 683 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 TADA3O75528 432 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 YEATS4O95619 227 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 ACAT1P24752 427 aaKnown RBP17.52■□□□□ 0.4
PTPRA-206ENST00000430705 CASP1P29466 404 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 PNPLA4P41247 253 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 TUFMP49411 452 aaKnown RBP17.52■□□□□ 0.4
PTPRA-206ENST00000430705 CSTF1Q05048 431 aaKnown RBP17.52■□□□□ 0.4
PTPRA-206ENST00000430705 EHHADHQ08426 723 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 PKP1Q13835 747 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 GAS6Q14393 721 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 ZC3H14Q6PJT7 736 aaKnown RBP17.52■□□□□ 0.4
PTPRA-206ENST00000430705 TXNDC11Q6PKC3 985 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 ITIH5Q86UX2 942 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 CBWD2Q8IUF1 395 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 CCDC65Q8IXS2 484 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 GPD1LQ8N335 351 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 LRRC52Q8N7C0 313 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 ZBTB44Q8NCP5 570 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 RIN3Q8TB24 985 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 SPPL2BQ8TCT7 592 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 C2orf15Q8WU43 125 aaKnown RBP17.52■□□□□ 0.4
PTPRA-206ENST00000430705 DHX58Q96C10 678 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 SMG9Q9H0W8 520 aaKnown RBP17.52■□□□□ 0.4
PTPRA-206ENST00000430705 ITGA11Q9UKX5 1188 aa17.52■□□□□ 0.4
PTPRA-206ENST00000430705 SLC38A8A6NNN8 435 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 CHADO15335 359 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 LILRB5O75023 590 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 LDHAP00338 332 aaKnown RBP17.51■□□□□ 0.39
PTPRA-206ENST00000430705 CHRNB1P11230 501 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 CCNE1P24864 410 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 WEE1P30291 646 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 BFSP1Q12934 665 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 SDHAF4Q5VUM1 108 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 CNNM4Q6P4Q7 775 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 LIMS2Q7Z4I7 341 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 THEM5Q8N1Q8 247 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 FAM200AQ8TCP9 573 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 KCNG4Q8TDN1 519 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
PTPRA-206ENST00000430705 LEO1Q8WVC0 666 aaPredicted RBP17.51■□□□□ 0.39
PTPRA-206ENST00000430705 FAM3CQ92520 227 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 E2F7Q96AV8 911 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 PI4K2AQ9BTU6 479 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 SLC46A2Q9BY10 475 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 TMEM206Q9H813 350 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 GDAP2Q9NXN4 497 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 MRPS17Q9Y2R5 130 aaKnown RBP17.51■□□□□ 0.39
PTPRA-206ENST00000430705 PTPRDP23468 1912 aa17.51■□□□□ 0.39
PTPRA-206ENST00000430705 MAN2B1O00754 1011 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 TGFB1I1O43294 461 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 CUTAO60888 179 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 FGF19O95750 216 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 F11P03951 625 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 FOXD4L6Q3SYB3 417 aaPredicted RBP17.5■□□□□ 0.39
PTPRA-206ENST00000430705 INTS6LQ5JSJ4 861 aaKnown RBP17.5■□□□□ 0.39
PTPRA-206ENST00000430705 FOXD4L3Q6VB84 417 aaPredicted RBP17.5■□□□□ 0.39
PTPRA-206ENST00000430705 DCLK2Q8N568 766 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 CSGALNACT2Q8N6G5 542 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 TTC8Q8TAM2 541 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 KBTBD7Q8WVZ9 684 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 CHFRQ96EP1 664 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
PTPRA-206ENST00000430705 TASP1Q9H6P5 420 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 INTS13Q9NVM9 706 aa17.5■□□□□ 0.39
PTPRA-206ENST00000430705 DDX43Q9NXZ2 648 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms