RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ABI2Q9NYB9 513 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-202ENST00000430200 MAFFQ9ULX9 164 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.37
HDAC4-202ENST00000430200 SPAG17Q6Q759 2223 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 MYOFQ9NZM1 2061 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 FAM170BA6NMN3 283 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 ZNF197O14709 1029 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 EXTL3O43909 919 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 ZSCAN22P10073 491 aaPredicted RBP12.7□□□□□ -0.38
HDAC4-202ENST00000430200 HAPLN1P10915 354 aaPredicted RBP12.7□□□□□ -0.38
HDAC4-202ENST00000430200 TDGF1P13385 188 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 HMGA1P17096 107 aaKnown RBP12.7□□□□□ -0.38
HDAC4-202ENST00000430200 GABRR2P28476 465 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 ABCD1P33897 745 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 EPHB3P54753 998 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 PFKPQ01813 784 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 BFSP1Q12934 665 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 GAS6Q14393 721 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 SV2CQ496J9 727 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 ARMCX5Q6P1M9 558 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 TXNDC11Q6PKC3 985 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 ELMOD1Q8N336 334 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 KBTBD7Q8WVZ9 684 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 TRMT61BQ9BVS5 477 aaKnown RBP12.7□□□□□ -0.38
HDAC4-202ENST00000430200 BLZF1Q9H2G9 400 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 SLITRK6Q9H5Y7 841 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 BRD9Q9H8M2 597 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 C2orf42Q9NWW7 574 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
HDAC4-202ENST00000430200 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.7□□□□□ -0.38
HDAC4-202ENST00000430200 RALGAPA1Q6GYQ0 2036 aa12.7□□□□□ -0.38
HDAC4-202ENST00000430200 SLC38A8A6NNN8 435 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 CUTAO60888 179 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 PSMC3P17980 439 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 ASIC1P78348 528 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 POU5F1Q01860 360 aaKnown RBP12.69□□□□□ -0.38
HDAC4-202ENST00000430200 TNK2Q07912 1038 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 FCHO2Q0JRZ9 810 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 MTAPQ13126 283 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 MGAT5BQ3V5L5 792 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 GPR158Q5T848 1215 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 CNNM4Q6P4Q7 775 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 Q6ZS52 159 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 ARID3BQ8IVW6 561 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-202ENST00000430200 MFSD6LQ8IWD5 586 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 GPD1LQ8N335 351 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 LEMD2Q8NC56 503 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 PLEKHO2Q8TD55 490 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 SHDQ96IW2 340 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 ZNF560Q96MR9 790 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 OXCT2Q9BYC2 517 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-202ENST00000430200 PRMT8Q9NR22 394 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-202ENST00000430200 SPATA6Q9NWH7 488 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-202ENST00000430200 HSPBP1Q9NZL4 362 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 PCDHA7Q9UN72 937 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 ZDHHC9Q9Y397 364 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 PIAS3Q9Y6X2 628 aa12.69□□□□□ -0.38
HDAC4-202ENST00000430200 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 TULP1O00294 542 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 POLR2DO15514 142 aaKnown RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 ATP2C2O75185 946 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 ALDH1A3P47895 512 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 CUL4BQ13620 913 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 ALCAMQ13740 583 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 POSTNQ15063 836 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 SOWAHAQ2M3V2 549 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 INTS6LQ5JSJ4 861 aaKnown RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 FAM26FQ5R3K3 315 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 RESP18Q5W5W9 173 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 LIMS2Q7Z4I7 341 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 NT5DC4Q86YG4 428 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 CCDC65Q8IXS2 484 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 LRRC52Q8N7C0 313 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 SUMF1Q8NBK3 374 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 DEPDC1BQ8WUY9 529 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 NELL1Q92832 810 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 ELMO3Q96BJ8 720 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 OSBPL6Q9BZF3 934 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 ATXN3LQ9H3M9 355 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 RBM12Q9NTZ6 932 aaKnown RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 TMEM30AQ9NV96 361 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 INTS13Q9NVM9 706 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 DDX43Q9NXZ2 648 aaKnown RBP12.68□□□□□ -0.38
HDAC4-202ENST00000430200 GTSE1Q9NYZ3 720 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 HSFX1Q9UBD0 423 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 DSEQ9UL01 958 aa12.68□□□□□ -0.38
HDAC4-202ENST00000430200 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms