RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 GPIHBP1Q8IV16 184 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 TBC1D17Q9HA65 648 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 ZNF334Q9HCZ1 680 aaPredicted RBP18.25■□□□□ 0.51
UBE3D-204ENST00000430071 SLC2A4RGQ9NR83 387 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 AGPAT3Q9NRZ7 376 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 SIX4Q9UIU6 781 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 AGAP1Q9UPQ3 857 aa18.25■□□□□ 0.51
UBE3D-204ENST00000430071 STK25O00506 426 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 CLIC2O15247 247 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 CD44P16070 742 aaKnown RBP18.24■□□□□ 0.51
UBE3D-204ENST00000430071 MYBPC2Q14324 1141 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 CCDC142Q17RM4 750 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 COBLL1Q53SF7 1204 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 TMC8Q8IU68 726 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 GPD1LQ8N335 351 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 OR5B17Q8NGF7 314 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 ZNF512Q96ME7 567 aaPredicted RBP18.24■□□□□ 0.51
UBE3D-204ENST00000430071 FOXQ1Q9C009 403 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 TMLHEQ9NVH6 421 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 TMEM63CQ9P1W3 806 aa18.24■□□□□ 0.51
UBE3D-204ENST00000430071 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.24■□□□□ 0.51
UBE3D-204ENST00000430071 DMDP11532 3685 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 HCRTO43612 131 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 EPHA5P54756 1037 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 SLC39A12Q504Y0 691 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 FAM78AQ5JUQ0 283 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 STXBP5Q5T5C0 1151 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 RBM43Q6ZSC3 357 aaKnown RBP18.23■□□□□ 0.51
UBE3D-204ENST00000430071 MTSS1LQ765P7 747 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 PDZD4Q76G19 769 aaPredicted RBP18.23■□□□□ 0.51
UBE3D-204ENST00000430071 ADSSL1Q8N142 457 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 SHKBP1Q8TBC3 707 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 MTMR12Q9C0I1 747 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 ZCWPW1Q9H0M4 648 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 ARHGEF3Q9NR81 526 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 HSPBP1Q9NZL4 362 aa18.23■□□□□ 0.51
UBE3D-204ENST00000430071 PDXKO00764 312 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 LDHAP00338 332 aaKnown RBP18.22■□□□□ 0.51
UBE3D-204ENST00000430071 DCNP07585 359 aaKnown RBP18.22■□□□□ 0.51
UBE3D-204ENST00000430071 GLULP15104 373 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 PTMSP20962 102 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 CD72P21854 359 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 TEAD2Q15562 447 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 CCDC183Q5T5S1 534 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 HS2ST1Q7LGA3 356 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 OSTM1Q86WC4 334 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 CSGALNACT2Q8N6G5 542 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 TRIML1Q8N9V2 468 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 RDH13Q8NBN7 331 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 LPIN3Q9BQK8 851 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 GTPBP4Q9BZE4 634 aaKnown RBP18.22■□□□□ 0.51
UBE3D-204ENST00000430071 GDE1Q9NZC3 331 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 L1RE1Q9UN81 338 aa18.22■□□□□ 0.51
UBE3D-204ENST00000430071 MTF2Q9Y483 593 aaPredicted RBP18.22■□□□□ 0.51
UBE3D-204ENST00000430071 SHISA7A6NL88 538 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 PPP1R3GB7ZBB8 358 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 KIF20AO95235 890 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 ATF6P18850 670 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 VIPR2P41587 438 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 SNRPFP62306 86 aaKnown RBP18.21■□□□□ 0.51
UBE3D-204ENST00000430071 BFSP1Q12934 665 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 GRM2Q14416 872 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 NFKBIBQ15653 356 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 ZCWPW2Q504Y3 356 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 IQCEQ6IPM2 695 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 CAVIN1Q6NZI2 390 aaKnown RBP18.21■□□□□ 0.51
UBE3D-204ENST00000430071 GAREM2Q75VX8 874 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 NT5DC4Q86YG4 428 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 C12orf56Q8IXR9 622 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 ELMOD1Q8N336 334 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 PDCL2Q8N4E4 241 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 RSPRY1Q96DX4 576 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 ASB16Q96NS5 453 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 PRRX2Q99811 253 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 ASAH2Q9NR71 780 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 MAFFQ9ULX9 164 aa18.21■□□□□ 0.51
UBE3D-204ENST00000430071 A0A1W2PRU2 124 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 ZNF197O14709 1029 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 KRT19P08727 400 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 ACAT1P24752 427 aaKnown RBP18.2■□□□□ 0.5
UBE3D-204ENST00000430071 GPR15P49685 360 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 CYP2J2P51589 502 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 PMS1P54277 932 aaKnown RBP18.2■□□□□ 0.5
UBE3D-204ENST00000430071 SV2CQ496J9 727 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 SLC44A4Q53GD3 710 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 CYP4A22Q5TCH4 519 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 DNAJB7Q7Z6W7 309 aaPredicted RBP18.2■□□□□ 0.5
UBE3D-204ENST00000430071 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 DTWD2Q8NBA8 298 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 GOLGA5Q8TBA6 731 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 GIPC2Q8TF65 315 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 ATOH1Q92858 354 aaPredicted RBP18.2■□□□□ 0.5
UBE3D-204ENST00000430071 OXCT2Q9BYC2 517 aaPredicted RBP18.2■□□□□ 0.5
UBE3D-204ENST00000430071 GZF1Q9H116 711 aaPredicted RBP18.2■□□□□ 0.5
UBE3D-204ENST00000430071 INTS13Q9NVM9 706 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 DMAC2Q9NW81 257 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 DLGAP2Q9P1A6 1054 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms